Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42SE2Q9NRR3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDC42SE2Q9NRR3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42SE2Q9NRR3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 AL391121.1-201ENST00000607967 1349 ntBASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDC42SE2Q9NRR3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 LINC01003-201ENST00000564834 1764 ntBASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.61■□□□□ 0.41
CDC42SE2Q9NRR3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC42SE2Q9NRR3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDC42SE2Q9NRR3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDC42SE2Q9NRR3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDC42SE2Q9NRR3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC42SE2Q9NRR3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDC42SE2Q9NRR3 AC100797.4-201ENST00000631653 1827 ntBASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC42SE2Q9NRR3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 CAHM-201ENST00000604200 896 ntBASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC42SE2Q9NRR3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDC42SE2Q9NRR3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC42SE2Q9NRR3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42SE2Q9NRR3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42SE2Q9NRR3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 AP002414.2-202ENST00000590929 1450 ntBASIC17.5■□□□□ 0.39
CDC42SE2Q9NRR3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42SE2Q9NRR3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 AC136428.2-201ENST00000563187 214 ntBASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42SE2Q9NRR3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 AC097358.2-201ENST00000607541 1159 ntBASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42SE2Q9NRR3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC42SE2Q9NRR3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms