Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Crlf1Q9JM58 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.36■□□□□ 0.69
Crlf1Q9JM58 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf1Q9JM58 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crlf1Q9JM58 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf1Q9JM58 Gm45364-201ENSMUST00000210883 159 ntBASIC19.35■□□□□ 0.69
Crlf1Q9JM58 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf1Q9JM58 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crlf1Q9JM58 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf1Q9JM58 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Crlf1Q9JM58 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Crlf1Q9JM58 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crlf1Q9JM58 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Crlf1Q9JM58 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crlf1Q9JM58 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf1Q9JM58 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Crlf1Q9JM58 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf1Q9JM58 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf1Q9JM58 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf1Q9JM58 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf1Q9JM58 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.3■□□□□ 0.68
Crlf1Q9JM58 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf1Q9JM58 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.3■□□□□ 0.68
Crlf1Q9JM58 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.3■□□□□ 0.68
Crlf1Q9JM58 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf1Q9JM58 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.29■□□□□ 0.68
Crlf1Q9JM58 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.29■□□□□ 0.68
Crlf1Q9JM58 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf1Q9JM58 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf1Q9JM58 Gm15546-201ENSMUST00000122095 826 ntBASIC19.28■□□□□ 0.68
Crlf1Q9JM58 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Crlf1Q9JM58 Gm5921-201ENSMUST00000075898 882 ntBASIC19.28■□□□□ 0.68
Crlf1Q9JM58 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf1Q9JM58 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf1Q9JM58 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Crlf1Q9JM58 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf1Q9JM58 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf1Q9JM58 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.26■□□□□ 0.67
Crlf1Q9JM58 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf1Q9JM58 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf1Q9JM58 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf1Q9JM58 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.25■□□□□ 0.67
Crlf1Q9JM58 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Crlf1Q9JM58 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf1Q9JM58 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf1Q9JM58 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.23■□□□□ 0.67
Crlf1Q9JM58 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf1Q9JM58 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf1Q9JM58 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf1Q9JM58 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf1Q9JM58 Gm10420-201ENSMUST00000121713 882 ntBASIC19.21■□□□□ 0.67
Crlf1Q9JM58 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.21■□□□□ 0.67
Crlf1Q9JM58 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Crlf1Q9JM58 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf1Q9JM58 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Crlf1Q9JM58 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.2■□□□□ 0.66
Crlf1Q9JM58 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf1Q9JM58 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.19■□□□□ 0.66
Crlf1Q9JM58 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf1Q9JM58 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf1Q9JM58 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf1Q9JM58 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf1Q9JM58 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf1Q9JM58 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.16■□□□□ 0.66
Crlf1Q9JM58 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf1Q9JM58 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf1Q9JM58 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf1Q9JM58 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf1Q9JM58 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf1Q9JM58 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Crlf1Q9JM58 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Crlf1Q9JM58 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf1Q9JM58 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf1Q9JM58 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf1Q9JM58 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf1Q9JM58 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.12■□□□□ 0.65
Crlf1Q9JM58 Gm37136-201ENSMUST00000194368 194 ntBASIC19.12■□□□□ 0.65
Crlf1Q9JM58 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf1Q9JM58 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.11■□□□□ 0.65
Crlf1Q9JM58 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf1Q9JM58 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.11■□□□□ 0.65
Crlf1Q9JM58 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.11■□□□□ 0.65
Crlf1Q9JM58 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf1Q9JM58 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crlf1Q9JM58 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crlf1Q9JM58 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crlf1Q9JM58 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Crlf1Q9JM58 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms