Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herpud1Q9JJK5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Herpud1Q9JJK5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Herpud1Q9JJK5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud1Q9JJK5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.48■□□□□ 0.71
Herpud1Q9JJK5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud1Q9JJK5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herpud1Q9JJK5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud1Q9JJK5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud1Q9JJK5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herpud1Q9JJK5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud1Q9JJK5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud1Q9JJK5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Herpud1Q9JJK5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.45■□□□□ 0.7
Herpud1Q9JJK5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud1Q9JJK5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud1Q9JJK5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Herpud1Q9JJK5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Herpud1Q9JJK5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Herpud1Q9JJK5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Herpud1Q9JJK5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Herpud1Q9JJK5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Herpud1Q9JJK5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Herpud1Q9JJK5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Herpud1Q9JJK5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.4■□□□□ 0.7
Herpud1Q9JJK5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud1Q9JJK5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud1Q9JJK5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Herpud1Q9JJK5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Herpud1Q9JJK5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Herpud1Q9JJK5 Gm30023-201ENSMUST00000197970 889 ntBASIC19.39■□□□□ 0.69
Herpud1Q9JJK5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Herpud1Q9JJK5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Herpud1Q9JJK5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
Herpud1Q9JJK5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herpud1Q9JJK5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herpud1Q9JJK5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herpud1Q9JJK5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Herpud1Q9JJK5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herpud1Q9JJK5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Herpud1Q9JJK5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herpud1Q9JJK5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.36■□□□□ 0.69
Herpud1Q9JJK5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Herpud1Q9JJK5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.34■□□□□ 0.69
Herpud1Q9JJK5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Herpud1Q9JJK5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Herpud1Q9JJK5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herpud1Q9JJK5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herpud1Q9JJK5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herpud1Q9JJK5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herpud1Q9JJK5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Herpud1Q9JJK5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Herpud1Q9JJK5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Herpud1Q9JJK5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herpud1Q9JJK5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Herpud1Q9JJK5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herpud1Q9JJK5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Herpud1Q9JJK5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Herpud1Q9JJK5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herpud1Q9JJK5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
Herpud1Q9JJK5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Herpud1Q9JJK5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herpud1Q9JJK5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herpud1Q9JJK5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Herpud1Q9JJK5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herpud1Q9JJK5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Herpud1Q9JJK5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Herpud1Q9JJK5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Herpud1Q9JJK5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Herpud1Q9JJK5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Herpud1Q9JJK5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Herpud1Q9JJK5 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms