Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ssna1Q9JJ94 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssna1Q9JJ94 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssna1Q9JJ94 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssna1Q9JJ94 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssna1Q9JJ94 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssna1Q9JJ94 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssna1Q9JJ94 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssna1Q9JJ94 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssna1Q9JJ94 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssna1Q9JJ94 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssna1Q9JJ94 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssna1Q9JJ94 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssna1Q9JJ94 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssna1Q9JJ94 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.2■□□□□ 0.66
Ssna1Q9JJ94 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssna1Q9JJ94 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssna1Q9JJ94 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssna1Q9JJ94 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssna1Q9JJ94 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ssna1Q9JJ94 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.18■□□□□ 0.66
Ssna1Q9JJ94 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssna1Q9JJ94 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssna1Q9JJ94 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ssna1Q9JJ94 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Ssna1Q9JJ94 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ssna1Q9JJ94 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssna1Q9JJ94 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssna1Q9JJ94 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ssna1Q9JJ94 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ssna1Q9JJ94 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssna1Q9JJ94 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Ssna1Q9JJ94 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.11■□□□□ 0.65
Ssna1Q9JJ94 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssna1Q9JJ94 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.1■□□□□ 0.65
Ssna1Q9JJ94 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssna1Q9JJ94 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ssna1Q9JJ94 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssna1Q9JJ94 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssna1Q9JJ94 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ssna1Q9JJ94 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Ssna1Q9JJ94 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssna1Q9JJ94 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.09■□□□□ 0.65
Ssna1Q9JJ94 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssna1Q9JJ94 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ssna1Q9JJ94 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.08■□□□□ 0.65
Ssna1Q9JJ94 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssna1Q9JJ94 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssna1Q9JJ94 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssna1Q9JJ94 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssna1Q9JJ94 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssna1Q9JJ94 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssna1Q9JJ94 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssna1Q9JJ94 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssna1Q9JJ94 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ssna1Q9JJ94 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssna1Q9JJ94 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.06■□□□□ 0.64
Ssna1Q9JJ94 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssna1Q9JJ94 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssna1Q9JJ94 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ssna1Q9JJ94 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssna1Q9JJ94 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms