Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.93■■■□□ 2.22
ZSWIM4Q9H7M6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.93■■■□□ 2.22
ZSWIM4Q9H7M6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.93■■■□□ 2.22
ZSWIM4Q9H7M6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
ZSWIM4Q9H7M6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
ZSWIM4Q9H7M6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.92■■■□□ 2.22
ZSWIM4Q9H7M6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZSWIM4Q9H7M6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
ZSWIM4Q9H7M6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ZSWIM4Q9H7M6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ZSWIM4Q9H7M6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ZSWIM4Q9H7M6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ZSWIM4Q9H7M6 AC135983.2-203ENST00000454486 1613 ntBASIC28.89■■■□□ 2.22
ZSWIM4Q9H7M6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
ZSWIM4Q9H7M6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
ZSWIM4Q9H7M6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
ZSWIM4Q9H7M6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 DUX4L11-201ENST00000611504 1267 ntBASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 DUX4L12-201ENST00000614593 1267 ntBASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 DUX4L14-201ENST00000621227 1267 ntBASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZSWIM4Q9H7M6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
ZSWIM4Q9H7M6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.86■■■□□ 2.21
ZSWIM4Q9H7M6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
ZSWIM4Q9H7M6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.85■■■□□ 2.21
ZSWIM4Q9H7M6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ZSWIM4Q9H7M6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZSWIM4Q9H7M6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZSWIM4Q9H7M6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZSWIM4Q9H7M6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ZSWIM4Q9H7M6 WHAMMP2-203ENST00000563942 1603 ntBASIC28.83■■■□□ 2.21
ZSWIM4Q9H7M6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ZSWIM4Q9H7M6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
ZSWIM4Q9H7M6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
ZSWIM4Q9H7M6 AP004833.2-201ENST00000532228 1454 ntBASIC28.82■■■□□ 2.2
ZSWIM4Q9H7M6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
ZSWIM4Q9H7M6 AL139393.2-201ENST00000608721 2025 ntBASIC28.81■■■□□ 2.2
ZSWIM4Q9H7M6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.81■■■□□ 2.2
ZSWIM4Q9H7M6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.81■■■□□ 2.2
ZSWIM4Q9H7M6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZSWIM4Q9H7M6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.8■■■□□ 2.2
ZSWIM4Q9H7M6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZSWIM4Q9H7M6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ZSWIM4Q9H7M6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZSWIM4Q9H7M6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ZSWIM4Q9H7M6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L13-201ENST00000554103 1267 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L15-201ENST00000611059 1267 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L23-201ENST00000615195 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L24-201ENST00000617576 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L22-201ENST00000618238 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L20-201ENST00000619712 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L21-201ENST00000622058 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L10-201ENST00000622460 1267 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 DUX4L25-201ENST00000624915 1269 ntBASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ZSWIM4Q9H7M6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.76■■■□□ 2.19
ZSWIM4Q9H7M6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ZSWIM4Q9H7M6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ZSWIM4Q9H7M6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ZSWIM4Q9H7M6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZSWIM4Q9H7M6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZSWIM4Q9H7M6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZSWIM4Q9H7M6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.73■■■□□ 2.19
ZSWIM4Q9H7M6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ZSWIM4Q9H7M6 MIR3648-2-201ENST00000581792 180 ntBASIC28.72■■■□□ 2.19
ZSWIM4Q9H7M6 MIR3648-1-201ENST00000615959 180 ntBASIC28.72■■■□□ 2.19
ZSWIM4Q9H7M6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZSWIM4Q9H7M6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.71■■■□□ 2.19
ZSWIM4Q9H7M6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZSWIM4Q9H7M6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZSWIM4Q9H7M6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.71■■■□□ 2.19
ZSWIM4Q9H7M6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ZSWIM4Q9H7M6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ZSWIM4Q9H7M6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.7■■■□□ 2.18
ZSWIM4Q9H7M6 CR559946.2-201ENST00000623684 991 ntBASIC28.7■■■□□ 2.18
ZSWIM4Q9H7M6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.7■■■□□ 2.18
ZSWIM4Q9H7M6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZSWIM4Q9H7M6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZSWIM4Q9H7M6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.69■■■□□ 2.18
ZSWIM4Q9H7M6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.69■■■□□ 2.18
ZSWIM4Q9H7M6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ZSWIM4Q9H7M6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
ZSWIM4Q9H7M6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms