Protein–RNA interactions for Protein: Q9H5F2

C11orf1, UPF0686 protein C11orf1, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1Q9H5F2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
C11orf1Q9H5F2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf1Q9H5F2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf1Q9H5F2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
C11orf1Q9H5F2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
C11orf1Q9H5F2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
C11orf1Q9H5F2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf1Q9H5F2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf1Q9H5F2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf1Q9H5F2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
C11orf1Q9H5F2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf1Q9H5F2 AC091060.1-201ENST00000623524 1766 ntBASIC20.67■□□□□ 0.9
C11orf1Q9H5F2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf1Q9H5F2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf1Q9H5F2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf1Q9H5F2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf1Q9H5F2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf1Q9H5F2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf1Q9H5F2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.65■□□□□ 0.9
C11orf1Q9H5F2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C11orf1Q9H5F2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf1Q9H5F2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf1Q9H5F2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf1Q9H5F2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf1Q9H5F2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf1Q9H5F2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf1Q9H5F2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf1Q9H5F2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.61■□□□□ 0.89
C11orf1Q9H5F2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf1Q9H5F2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf1Q9H5F2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.61■□□□□ 0.89
C11orf1Q9H5F2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf1Q9H5F2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.6■□□□□ 0.89
C11orf1Q9H5F2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.6■□□□□ 0.89
C11orf1Q9H5F2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf1Q9H5F2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C11orf1Q9H5F2 AL133380.1-201ENST00000506013 324 ntBASIC20.58■□□□□ 0.89
C11orf1Q9H5F2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.57■□□□□ 0.88
C11orf1Q9H5F2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf1Q9H5F2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf1Q9H5F2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.56■□□□□ 0.88
C11orf1Q9H5F2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C11orf1Q9H5F2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.55■□□□□ 0.88
C11orf1Q9H5F2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C11orf1Q9H5F2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf1Q9H5F2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf1Q9H5F2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
C11orf1Q9H5F2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf1Q9H5F2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf1Q9H5F2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C11orf1Q9H5F2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
C11orf1Q9H5F2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf1Q9H5F2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf1Q9H5F2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf1Q9H5F2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf1Q9H5F2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf1Q9H5F2 AC127502.1-201ENST00000399971 1502 ntBASIC20.53■□□□□ 0.88
C11orf1Q9H5F2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.52■□□□□ 0.88
C11orf1Q9H5F2 AC020928.2-201ENST00000588717 2197 ntBASIC20.52■□□□□ 0.88
C11orf1Q9H5F2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf1Q9H5F2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
C11orf1Q9H5F2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
C11orf1Q9H5F2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.51■□□□□ 0.87
C11orf1Q9H5F2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf1Q9H5F2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C11orf1Q9H5F2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf1Q9H5F2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf1Q9H5F2 AC100797.4-201ENST00000631653 1827 ntBASIC20.5■□□□□ 0.87
C11orf1Q9H5F2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf1Q9H5F2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
C11orf1Q9H5F2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C11orf1Q9H5F2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
C11orf1Q9H5F2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf1Q9H5F2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C11orf1Q9H5F2 AC145676.1-201ENST00000514988 2004 ntBASIC20.49■□□□□ 0.87
C11orf1Q9H5F2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf1Q9H5F2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf1Q9H5F2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C11orf1Q9H5F2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms