Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RNF41Q9H4P4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
RNF41Q9H4P4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.42■■■□□ 2.46
RNF41Q9H4P4 ABCB10P3-201ENST00000561950 2166 ntBASIC30.42■■■□□ 2.46
RNF41Q9H4P4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
RNF41Q9H4P4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.41■■■□□ 2.46
RNF41Q9H4P4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.41■■■□□ 2.46
RNF41Q9H4P4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF41Q9H4P4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.39■■■□□ 2.46
RNF41Q9H4P4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RNF41Q9H4P4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.39■■■□□ 2.46
RNF41Q9H4P4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.39■■■□□ 2.46
RNF41Q9H4P4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.39■■■□□ 2.46
RNF41Q9H4P4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.39■■■□□ 2.46
RNF41Q9H4P4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.38■■■□□ 2.45
RNF41Q9H4P4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.38■■■□□ 2.45
RNF41Q9H4P4 DUX4L13-201ENST00000554103 1267 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L15-201ENST00000611059 1267 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L23-201ENST00000615195 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L24-201ENST00000617576 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L22-201ENST00000618238 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L20-201ENST00000619712 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L21-201ENST00000622058 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L10-201ENST00000622460 1267 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 DUX4L25-201ENST00000624915 1269 ntBASIC30.37■■■□□ 2.45
RNF41Q9H4P4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.36■■■□□ 2.45
RNF41Q9H4P4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
RNF41Q9H4P4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.35■■■□□ 2.45
RNF41Q9H4P4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
RNF41Q9H4P4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.35■■■□□ 2.45
RNF41Q9H4P4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
RNF41Q9H4P4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
RNF41Q9H4P4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RNF41Q9H4P4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.34■■■□□ 2.45
RNF41Q9H4P4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.34■■■□□ 2.45
RNF41Q9H4P4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.34■■■□□ 2.45
RNF41Q9H4P4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RNF41Q9H4P4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RNF41Q9H4P4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF41Q9H4P4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF41Q9H4P4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.32■■■□□ 2.44
RNF41Q9H4P4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF41Q9H4P4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF41Q9H4P4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF41Q9H4P4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.31■■■□□ 2.44
RNF41Q9H4P4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.31■■■□□ 2.44
RNF41Q9H4P4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RNF41Q9H4P4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
RNF41Q9H4P4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RNF41Q9H4P4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.29■■■□□ 2.44
RNF41Q9H4P4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
RNF41Q9H4P4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
RNF41Q9H4P4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF41Q9H4P4 AC100797.4-201ENST00000631653 1827 ntBASIC30.28■■■□□ 2.44
RNF41Q9H4P4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
RNF41Q9H4P4 AC139426.1-201ENST00000568218 2529 ntBASIC30.28■■■□□ 2.44
RNF41Q9H4P4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF41Q9H4P4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RNF41Q9H4P4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RNF41Q9H4P4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RNF41Q9H4P4 MIR3648-2-201ENST00000581792 180 ntBASIC30.26■■■□□ 2.43
RNF41Q9H4P4 MIR3648-1-201ENST00000615959 180 ntBASIC30.26■■■□□ 2.43
RNF41Q9H4P4 CR559946.2-201ENST00000623684 991 ntBASIC30.26■■■□□ 2.43
RNF41Q9H4P4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.26■■■□□ 2.43
RNF41Q9H4P4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
RNF41Q9H4P4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF41Q9H4P4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.24■■■□□ 2.43
RNF41Q9H4P4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF41Q9H4P4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.23■■■□□ 2.43
RNF41Q9H4P4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RNF41Q9H4P4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RNF41Q9H4P4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RNF41Q9H4P4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.21■■■□□ 2.43
RNF41Q9H4P4 AC110285.7-201ENST00000624417 1536 ntBASIC30.21■■■□□ 2.43
RNF41Q9H4P4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF41Q9H4P4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF41Q9H4P4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RNF41Q9H4P4 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.2■■■□□ 2.43
RNF41Q9H4P4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RNF41Q9H4P4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.19■■■□□ 2.42
RNF41Q9H4P4 AC016575.1-201ENST00000607026 382 ntBASIC30.18■■■□□ 2.42
RNF41Q9H4P4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RNF41Q9H4P4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.17■■■□□ 2.42
RNF41Q9H4P4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms