Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC8Q9H0W5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC8Q9H0W5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC8Q9H0W5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC8Q9H0W5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC8Q9H0W5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CCDC8Q9H0W5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC8Q9H0W5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
CCDC8Q9H0W5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.58■■■□□ 2.65
CCDC8Q9H0W5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.57■■■□□ 2.64
CCDC8Q9H0W5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC8Q9H0W5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.56■■■□□ 2.64
CCDC8Q9H0W5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.55■■■□□ 2.64
CCDC8Q9H0W5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.55■■■□□ 2.64
CCDC8Q9H0W5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.55■■■□□ 2.64
CCDC8Q9H0W5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC8Q9H0W5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 AP004833.2-201ENST00000532228 1454 ntBASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.53■■■□□ 2.64
CCDC8Q9H0W5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC8Q9H0W5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.51■■■□□ 2.64
CCDC8Q9H0W5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
CCDC8Q9H0W5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.51■■■□□ 2.63
CCDC8Q9H0W5 AC100797.4-201ENST00000631653 1827 ntBASIC31.51■■■□□ 2.63
CCDC8Q9H0W5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L13-201ENST00000554103 1267 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L15-201ENST00000611059 1267 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L23-201ENST00000615195 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L24-201ENST00000617576 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L22-201ENST00000618238 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L20-201ENST00000619712 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L21-201ENST00000622058 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L10-201ENST00000622460 1267 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 DUX4L25-201ENST00000624915 1269 ntBASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CCDC8Q9H0W5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.49■■■□□ 2.63
CCDC8Q9H0W5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC8Q9H0W5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC8Q9H0W5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC8Q9H0W5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC8Q9H0W5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC8Q9H0W5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.48■■■□□ 2.63
CCDC8Q9H0W5 CR559946.2-201ENST00000623684 991 ntBASIC31.48■■■□□ 2.63
CCDC8Q9H0W5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC8Q9H0W5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC8Q9H0W5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 MIR3648-2-201ENST00000581792 180 ntBASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 MIR3648-1-201ENST00000615959 180 ntBASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC8Q9H0W5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC8Q9H0W5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CCDC8Q9H0W5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC8Q9H0W5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC8Q9H0W5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC8Q9H0W5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.45■■■□□ 2.62
CCDC8Q9H0W5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.45■■■□□ 2.62
CCDC8Q9H0W5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.44■■■□□ 2.62
CCDC8Q9H0W5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.44■■■□□ 2.62
CCDC8Q9H0W5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.44■■■□□ 2.62
CCDC8Q9H0W5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
CCDC8Q9H0W5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC8Q9H0W5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC8Q9H0W5 AC016575.1-201ENST00000607026 382 ntBASIC31.43■■■□□ 2.62
CCDC8Q9H0W5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC8Q9H0W5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC8Q9H0W5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC8Q9H0W5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC8Q9H0W5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC8Q9H0W5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC8Q9H0W5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC8Q9H0W5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.39■■■□□ 2.62
CCDC8Q9H0W5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.39■■■□□ 2.62
CCDC8Q9H0W5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CCDC8Q9H0W5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC8Q9H0W5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC8Q9H0W5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms