Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem54Q9D7S1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tmem54Q9D7S1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tmem54Q9D7S1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem54Q9D7S1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem54Q9D7S1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem54Q9D7S1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem54Q9D7S1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem54Q9D7S1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem54Q9D7S1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem54Q9D7S1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem54Q9D7S1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem54Q9D7S1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem54Q9D7S1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem54Q9D7S1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem54Q9D7S1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem54Q9D7S1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem54Q9D7S1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem54Q9D7S1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tmem54Q9D7S1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tmem54Q9D7S1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tmem54Q9D7S1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tmem54Q9D7S1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem54Q9D7S1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem54Q9D7S1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem54Q9D7S1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tmem54Q9D7S1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.67■□□□□ 0.9
Tmem54Q9D7S1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tmem54Q9D7S1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem54Q9D7S1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem54Q9D7S1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem54Q9D7S1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.65■□□□□ 0.9
Tmem54Q9D7S1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem54Q9D7S1 Particl-201ENSMUST00000205370 1560 ntBASIC20.64■□□□□ 0.9
Tmem54Q9D7S1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tmem54Q9D7S1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tmem54Q9D7S1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tmem54Q9D7S1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.61■□□□□ 0.89
Tmem54Q9D7S1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.61■□□□□ 0.89
Tmem54Q9D7S1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
Tmem54Q9D7S1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tmem54Q9D7S1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tmem54Q9D7S1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.6■□□□□ 0.89
Tmem54Q9D7S1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem54Q9D7S1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem54Q9D7S1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tmem54Q9D7S1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem54Q9D7S1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tmem54Q9D7S1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem54Q9D7S1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem54Q9D7S1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem54Q9D7S1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem54Q9D7S1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem54Q9D7S1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem54Q9D7S1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem54Q9D7S1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem54Q9D7S1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem54Q9D7S1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem54Q9D7S1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem54Q9D7S1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.53■□□□□ 0.88
Tmem54Q9D7S1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem54Q9D7S1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem54Q9D7S1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem54Q9D7S1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem54Q9D7S1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem54Q9D7S1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem54Q9D7S1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem54Q9D7S1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem54Q9D7S1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem54Q9D7S1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem54Q9D7S1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem54Q9D7S1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tmem54Q9D7S1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem54Q9D7S1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.47■□□□□ 0.87
Tmem54Q9D7S1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem54Q9D7S1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.45■□□□□ 0.86
Tmem54Q9D7S1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.45■□□□□ 0.86
Tmem54Q9D7S1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem54Q9D7S1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms