Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
3830403N18RikQ9D6C3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
3830403N18RikQ9D6C3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
3830403N18RikQ9D6C3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
3830403N18RikQ9D6C3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
3830403N18RikQ9D6C3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
3830403N18RikQ9D6C3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
3830403N18RikQ9D6C3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
3830403N18RikQ9D6C3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.75■■□□□ 1.55
3830403N18RikQ9D6C3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
3830403N18RikQ9D6C3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
3830403N18RikQ9D6C3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
3830403N18RikQ9D6C3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
3830403N18RikQ9D6C3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
3830403N18RikQ9D6C3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
3830403N18RikQ9D6C3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
3830403N18RikQ9D6C3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
3830403N18RikQ9D6C3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
3830403N18RikQ9D6C3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.71■■□□□ 1.55
3830403N18RikQ9D6C3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
3830403N18RikQ9D6C3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
3830403N18RikQ9D6C3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
3830403N18RikQ9D6C3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
3830403N18RikQ9D6C3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
3830403N18RikQ9D6C3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
3830403N18RikQ9D6C3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
3830403N18RikQ9D6C3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
3830403N18RikQ9D6C3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
3830403N18RikQ9D6C3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
3830403N18RikQ9D6C3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
3830403N18RikQ9D6C3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
3830403N18RikQ9D6C3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
3830403N18RikQ9D6C3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.67■■□□□ 1.54
3830403N18RikQ9D6C3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
3830403N18RikQ9D6C3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
3830403N18RikQ9D6C3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.66■■□□□ 1.54
3830403N18RikQ9D6C3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
3830403N18RikQ9D6C3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
3830403N18RikQ9D6C3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
3830403N18RikQ9D6C3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
3830403N18RikQ9D6C3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
3830403N18RikQ9D6C3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
3830403N18RikQ9D6C3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
3830403N18RikQ9D6C3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
3830403N18RikQ9D6C3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
3830403N18RikQ9D6C3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
3830403N18RikQ9D6C3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
3830403N18RikQ9D6C3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.61■■□□□ 1.53
3830403N18RikQ9D6C3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
3830403N18RikQ9D6C3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
3830403N18RikQ9D6C3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
3830403N18RikQ9D6C3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
3830403N18RikQ9D6C3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
3830403N18RikQ9D6C3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
3830403N18RikQ9D6C3 Gm30023-201ENSMUST00000197970 889 ntBASIC24.59■■□□□ 1.53
3830403N18RikQ9D6C3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
3830403N18RikQ9D6C3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
3830403N18RikQ9D6C3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
3830403N18RikQ9D6C3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
3830403N18RikQ9D6C3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
3830403N18RikQ9D6C3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
3830403N18RikQ9D6C3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
3830403N18RikQ9D6C3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
3830403N18RikQ9D6C3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
3830403N18RikQ9D6C3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
3830403N18RikQ9D6C3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
3830403N18RikQ9D6C3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.53■■□□□ 1.52
3830403N18RikQ9D6C3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
3830403N18RikQ9D6C3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
3830403N18RikQ9D6C3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
3830403N18RikQ9D6C3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
3830403N18RikQ9D6C3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
3830403N18RikQ9D6C3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
3830403N18RikQ9D6C3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
3830403N18RikQ9D6C3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
3830403N18RikQ9D6C3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms