Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Lysmd1Q9D0E3 Mir3960-201ENSMUST00000198213 73 ntBASIC26.71■■□□□ 1.87
Lysmd1Q9D0E3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.7■■□□□ 1.86
Lysmd1Q9D0E3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Lysmd1Q9D0E3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.7■■□□□ 1.86
Lysmd1Q9D0E3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Lysmd1Q9D0E3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Lysmd1Q9D0E3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Lysmd1Q9D0E3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Lysmd1Q9D0E3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Lysmd1Q9D0E3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Lysmd1Q9D0E3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Lysmd1Q9D0E3 Gm15820-201ENSMUST00000201566 728 ntBASIC26.67■■□□□ 1.86
Lysmd1Q9D0E3 Gm45364-201ENSMUST00000210883 159 ntBASIC26.67■■□□□ 1.86
Lysmd1Q9D0E3 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.67■■□□□ 1.86
Lysmd1Q9D0E3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.67■■□□□ 1.86
Lysmd1Q9D0E3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Lysmd1Q9D0E3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lysmd1Q9D0E3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lysmd1Q9D0E3 Gm45102-201ENSMUST00000207427 857 ntBASIC26.66■■□□□ 1.86
Lysmd1Q9D0E3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lysmd1Q9D0E3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lysmd1Q9D0E3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.65■■□□□ 1.86
Lysmd1Q9D0E3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lysmd1Q9D0E3 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.64■■□□□ 1.86
Lysmd1Q9D0E3 Gm14117-201ENSMUST00000122417 843 ntBASIC26.64■■□□□ 1.86
Lysmd1Q9D0E3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Lysmd1Q9D0E3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.63■■□□□ 1.85
Lysmd1Q9D0E3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Lysmd1Q9D0E3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Lysmd1Q9D0E3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.6■■□□□ 1.85
Lysmd1Q9D0E3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Lysmd1Q9D0E3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.6■■□□□ 1.85
Lysmd1Q9D0E3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lysmd1Q9D0E3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Lysmd1Q9D0E3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Lysmd1Q9D0E3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Lysmd1Q9D0E3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Lysmd1Q9D0E3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.57■■□□□ 1.84
Lysmd1Q9D0E3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Lysmd1Q9D0E3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Lysmd1Q9D0E3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Lysmd1Q9D0E3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Lysmd1Q9D0E3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Lysmd1Q9D0E3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Lysmd1Q9D0E3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Lysmd1Q9D0E3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Lysmd1Q9D0E3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Lysmd1Q9D0E3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.54■■□□□ 1.84
Lysmd1Q9D0E3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Lysmd1Q9D0E3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Lysmd1Q9D0E3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Lysmd1Q9D0E3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lysmd1Q9D0E3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.52■■□□□ 1.84
Lysmd1Q9D0E3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Lysmd1Q9D0E3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.5■■□□□ 1.83
Lysmd1Q9D0E3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.49■■□□□ 1.83
Lysmd1Q9D0E3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.49■■□□□ 1.83
Lysmd1Q9D0E3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Lysmd1Q9D0E3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Lysmd1Q9D0E3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lysmd1Q9D0E3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Lysmd1Q9D0E3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.48■■□□□ 1.83
Lysmd1Q9D0E3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lysmd1Q9D0E3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.48■■□□□ 1.83
Lysmd1Q9D0E3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Lysmd1Q9D0E3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.47■■□□□ 1.83
Lysmd1Q9D0E3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Lysmd1Q9D0E3 Gm30023-201ENSMUST00000197970 889 ntBASIC26.46■■□□□ 1.83
Lysmd1Q9D0E3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lysmd1Q9D0E3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Lysmd1Q9D0E3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.45■■□□□ 1.82
Lysmd1Q9D0E3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.45■■□□□ 1.82
Lysmd1Q9D0E3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.44■■□□□ 1.82
Lysmd1Q9D0E3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Lysmd1Q9D0E3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Lysmd1Q9D0E3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lysmd1Q9D0E3 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.43■■□□□ 1.82
Lysmd1Q9D0E3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Lysmd1Q9D0E3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lysmd1Q9D0E3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lysmd1Q9D0E3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lysmd1Q9D0E3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lysmd1Q9D0E3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Lysmd1Q9D0E3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lysmd1Q9D0E3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lysmd1Q9D0E3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lysmd1Q9D0E3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lysmd1Q9D0E3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Lysmd1Q9D0E3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Lysmd1Q9D0E3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Lysmd1Q9D0E3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Lysmd1Q9D0E3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lysmd1Q9D0E3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Lysmd1Q9D0E3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lysmd1Q9D0E3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lysmd1Q9D0E3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.34■■□□□ 1.81
Lysmd1Q9D0E3 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.33■■□□□ 1.81
Lysmd1Q9D0E3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lysmd1Q9D0E3 Gm9959-201ENSMUST00000068277 390 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms