Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssbp2Q9CYZ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssbp2Q9CYZ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.85■□□□□ 0.61
Ssbp2Q9CYZ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ssbp2Q9CYZ8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssbp2Q9CYZ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssbp2Q9CYZ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssbp2Q9CYZ8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssbp2Q9CYZ8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssbp2Q9CYZ8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Ssbp2Q9CYZ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssbp2Q9CYZ8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssbp2Q9CYZ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ssbp2Q9CYZ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssbp2Q9CYZ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ssbp2Q9CYZ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssbp2Q9CYZ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ssbp2Q9CYZ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssbp2Q9CYZ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssbp2Q9CYZ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp2Q9CYZ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp2Q9CYZ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssbp2Q9CYZ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssbp2Q9CYZ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssbp2Q9CYZ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ssbp2Q9CYZ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp2Q9CYZ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp2Q9CYZ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ssbp2Q9CYZ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssbp2Q9CYZ8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssbp2Q9CYZ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.73■□□□□ 0.59
Ssbp2Q9CYZ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.73■□□□□ 0.59
Ssbp2Q9CYZ8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp2Q9CYZ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.72■□□□□ 0.59
Ssbp2Q9CYZ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp2Q9CYZ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssbp2Q9CYZ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssbp2Q9CYZ8 Nkain2-201ENSMUST00000092602 558 ntBASIC18.71■□□□□ 0.59
Ssbp2Q9CYZ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssbp2Q9CYZ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ssbp2Q9CYZ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.7■□□□□ 0.58
Ssbp2Q9CYZ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp2Q9CYZ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ssbp2Q9CYZ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.69■□□□□ 0.58
Ssbp2Q9CYZ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.68■□□□□ 0.58
Ssbp2Q9CYZ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.68■□□□□ 0.58
Ssbp2Q9CYZ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssbp2Q9CYZ8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssbp2Q9CYZ8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssbp2Q9CYZ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.65■□□□□ 0.58
Ssbp2Q9CYZ8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssbp2Q9CYZ8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssbp2Q9CYZ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ssbp2Q9CYZ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.64■□□□□ 0.57
Ssbp2Q9CYZ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ssbp2Q9CYZ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssbp2Q9CYZ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssbp2Q9CYZ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssbp2Q9CYZ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ssbp2Q9CYZ8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssbp2Q9CYZ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssbp2Q9CYZ8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssbp2Q9CYZ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssbp2Q9CYZ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssbp2Q9CYZ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssbp2Q9CYZ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.6■□□□□ 0.57
Ssbp2Q9CYZ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssbp2Q9CYZ8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ssbp2Q9CYZ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ssbp2Q9CYZ8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ssbp2Q9CYZ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ssbp2Q9CYZ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ssbp2Q9CYZ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ssbp2Q9CYZ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms