Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Lsm7Q9CQQ8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lsm7Q9CQQ8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.95■■□□□ 1.42
Lsm7Q9CQQ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Lsm7Q9CQQ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lsm7Q9CQQ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lsm7Q9CQQ8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lsm7Q9CQQ8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lsm7Q9CQQ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lsm7Q9CQQ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.92■■□□□ 1.42
Lsm7Q9CQQ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lsm7Q9CQQ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Lsm7Q9CQQ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Lsm7Q9CQQ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Lsm7Q9CQQ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Lsm7Q9CQQ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lsm7Q9CQQ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lsm7Q9CQQ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Lsm7Q9CQQ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lsm7Q9CQQ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lsm7Q9CQQ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lsm7Q9CQQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lsm7Q9CQQ8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lsm7Q9CQQ8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lsm7Q9CQQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lsm7Q9CQQ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lsm7Q9CQQ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.85■■□□□ 1.41
Lsm7Q9CQQ8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lsm7Q9CQQ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Lsm7Q9CQQ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.84■■□□□ 1.41
Lsm7Q9CQQ8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.84■■□□□ 1.41
Lsm7Q9CQQ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lsm7Q9CQQ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lsm7Q9CQQ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Lsm7Q9CQQ8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.81■■□□□ 1.4
Lsm7Q9CQQ8 Amer2-203ENSMUST00000225247 2662 ntBASIC23.81■■□□□ 1.4
Lsm7Q9CQQ8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lsm7Q9CQQ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lsm7Q9CQQ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lsm7Q9CQQ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Lsm7Q9CQQ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Lsm7Q9CQQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Lsm7Q9CQQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Lsm7Q9CQQ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Lsm7Q9CQQ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lsm7Q9CQQ8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.77■■□□□ 1.4
Lsm7Q9CQQ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Lsm7Q9CQQ8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lsm7Q9CQQ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Lsm7Q9CQQ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Lsm7Q9CQQ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.76■■□□□ 1.39
Lsm7Q9CQQ8 Gm37136-201ENSMUST00000194368 194 ntBASIC23.76■■□□□ 1.39
Lsm7Q9CQQ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lsm7Q9CQQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lsm7Q9CQQ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lsm7Q9CQQ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Lsm7Q9CQQ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.74■■□□□ 1.39
Lsm7Q9CQQ8 Gm4799-201ENSMUST00000095396 657 ntBASIC23.73■■□□□ 1.39
Lsm7Q9CQQ8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Lsm7Q9CQQ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.72■■□□□ 1.39
Lsm7Q9CQQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Lsm7Q9CQQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lsm7Q9CQQ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Lsm7Q9CQQ8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.71■■□□□ 1.39
Lsm7Q9CQQ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lsm7Q9CQQ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Lsm7Q9CQQ8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lsm7Q9CQQ8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lsm7Q9CQQ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm7Q9CQQ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm7Q9CQQ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm7Q9CQQ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm7Q9CQQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lsm7Q9CQQ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lsm7Q9CQQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Lsm7Q9CQQ8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.67■■□□□ 1.38
Lsm7Q9CQQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.67■■□□□ 1.38
Lsm7Q9CQQ8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lsm7Q9CQQ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lsm7Q9CQQ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.65■■□□□ 1.38
Lsm7Q9CQQ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.64■■□□□ 1.38
Lsm7Q9CQQ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.64■■□□□ 1.37
Lsm7Q9CQQ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lsm7Q9CQQ8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lsm7Q9CQQ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Lsm7Q9CQQ8 Mir3960-201ENSMUST00000198213 73 ntBASIC23.63■■□□□ 1.37
Lsm7Q9CQQ8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.62■■□□□ 1.37
Lsm7Q9CQQ8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.62■■□□□ 1.37
Lsm7Q9CQQ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.62■■□□□ 1.37
Lsm7Q9CQQ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lsm7Q9CQQ8 Mir6538-201ENSMUST00000183713 110 ntBASIC23.61■■□□□ 1.37
Lsm7Q9CQQ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lsm7Q9CQQ8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lsm7Q9CQQ8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lsm7Q9CQQ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms