Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.87■□□□□ 0.45
Chchd1Q9CQA6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.87■□□□□ 0.45
Chchd1Q9CQA6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.87■□□□□ 0.45
Chchd1Q9CQA6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chchd1Q9CQA6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chchd1Q9CQA6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chchd1Q9CQA6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chchd1Q9CQA6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chchd1Q9CQA6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.85■□□□□ 0.45
Chchd1Q9CQA6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chchd1Q9CQA6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chchd1Q9CQA6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chchd1Q9CQA6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chchd1Q9CQA6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chchd1Q9CQA6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chchd1Q9CQA6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chchd1Q9CQA6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chchd1Q9CQA6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chchd1Q9CQA6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chchd1Q9CQA6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chchd1Q9CQA6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chchd1Q9CQA6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chchd1Q9CQA6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chchd1Q9CQA6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Chchd1Q9CQA6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chchd1Q9CQA6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chchd1Q9CQA6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chchd1Q9CQA6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Chchd1Q9CQA6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chchd1Q9CQA6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chchd1Q9CQA6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chchd1Q9CQA6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chchd1Q9CQA6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chchd1Q9CQA6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chchd1Q9CQA6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chchd1Q9CQA6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chchd1Q9CQA6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chchd1Q9CQA6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chchd1Q9CQA6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chchd1Q9CQA6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chchd1Q9CQA6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chchd1Q9CQA6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.69■□□□□ 0.42
Chchd1Q9CQA6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chchd1Q9CQA6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chchd1Q9CQA6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chchd1Q9CQA6 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chchd1Q9CQA6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chchd1Q9CQA6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chchd1Q9CQA6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms