Protein–RNA interactions for Protein: Q99N07

Ms4a6d, Membrane-spanning 4-domains subfamily A member 6D, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a6dQ99N07 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ms4a6dQ99N07 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ms4a6dQ99N07 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ms4a6dQ99N07 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ms4a6dQ99N07 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ms4a6dQ99N07 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.26■□□□□ 0.67
Ms4a6dQ99N07 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ms4a6dQ99N07 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a6dQ99N07 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ms4a6dQ99N07 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ms4a6dQ99N07 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ms4a6dQ99N07 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.23■□□□□ 0.67
Ms4a6dQ99N07 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.23■□□□□ 0.67
Ms4a6dQ99N07 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ms4a6dQ99N07 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ms4a6dQ99N07 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a6dQ99N07 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ms4a6dQ99N07 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ms4a6dQ99N07 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ms4a6dQ99N07 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ms4a6dQ99N07 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ms4a6dQ99N07 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ms4a6dQ99N07 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ms4a6dQ99N07 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ms4a6dQ99N07 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ms4a6dQ99N07 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ms4a6dQ99N07 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Ms4a6dQ99N07 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ms4a6dQ99N07 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ms4a6dQ99N07 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Ms4a6dQ99N07 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ms4a6dQ99N07 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ms4a6dQ99N07 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.14■□□□□ 0.65
Ms4a6dQ99N07 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ms4a6dQ99N07 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ms4a6dQ99N07 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Ms4a6dQ99N07 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ms4a6dQ99N07 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ms4a6dQ99N07 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ms4a6dQ99N07 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ms4a6dQ99N07 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ms4a6dQ99N07 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ms4a6dQ99N07 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ms4a6dQ99N07 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ms4a6dQ99N07 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ms4a6dQ99N07 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ms4a6dQ99N07 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ms4a6dQ99N07 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ms4a6dQ99N07 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ms4a6dQ99N07 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ms4a6dQ99N07 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ms4a6dQ99N07 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ms4a6dQ99N07 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms