Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.39■■□□□ 1.81
NELL2Q99435 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NELL2Q99435 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
NELL2Q99435 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.38■■□□□ 1.81
NELL2Q99435 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
NELL2Q99435 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.37■■□□□ 1.81
NELL2Q99435 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NELL2Q99435 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NELL2Q99435 AL033527.3-201ENST00000566366 1196 ntBASIC26.36■■□□□ 1.81
NELL2Q99435 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
NELL2Q99435 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NELL2Q99435 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
NELL2Q99435 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NELL2Q99435 AC018358.1-201ENST00000631079 1402 ntBASIC26.34■■□□□ 1.81
NELL2Q99435 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NELL2Q99435 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NELL2Q99435 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.33■■□□□ 1.81
NELL2Q99435 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.33■■□□□ 1.81
NELL2Q99435 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NELL2Q99435 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NELL2Q99435 U85056.1-201ENST00000616429 682 ntBASIC26.31■■□□□ 1.8
NELL2Q99435 AC148477.6-201ENST00000623746 465 ntBASIC26.31■■□□□ 1.8
NELL2Q99435 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NELL2Q99435 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NELL2Q99435 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
NELL2Q99435 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.3■■□□□ 1.8
NELL2Q99435 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NELL2Q99435 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.29■■□□□ 1.8
NELL2Q99435 AC060814.1-201ENST00000554326 538 ntBASIC26.29■■□□□ 1.8
NELL2Q99435 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NELL2Q99435 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
NELL2Q99435 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NELL2Q99435 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NELL2Q99435 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NELL2Q99435 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NELL2Q99435 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NELL2Q99435 AC135983.2-203ENST00000454486 1613 ntBASIC26.27■■□□□ 1.8
NELL2Q99435 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NELL2Q99435 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NELL2Q99435 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.26■■□□□ 1.79
NELL2Q99435 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NELL2Q99435 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
NELL2Q99435 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NELL2Q99435 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NELL2Q99435 TSPY13P-201ENST00000338964 914 ntBASIC26.23■■□□□ 1.79
NELL2Q99435 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.23■■□□□ 1.79
NELL2Q99435 WHAMMP2-203ENST00000563942 1603 ntBASIC26.22■■□□□ 1.79
NELL2Q99435 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NELL2Q99435 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
NELL2Q99435 AC110285.7-201ENST00000624417 1536 ntBASIC26.22■■□□□ 1.79
NELL2Q99435 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.21■■□□□ 1.79
NELL2Q99435 AC127502.1-201ENST00000399971 1502 ntBASIC26.21■■□□□ 1.79
NELL2Q99435 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.21■■□□□ 1.79
NELL2Q99435 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
NELL2Q99435 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NELL2Q99435 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.2■■□□□ 1.78
NELL2Q99435 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
NELL2Q99435 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
NELL2Q99435 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
NELL2Q99435 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NELL2Q99435 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NELL2Q99435 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NELL2Q99435 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.18■■□□□ 1.78
NELL2Q99435 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.18■■□□□ 1.78
NELL2Q99435 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.18■■□□□ 1.78
NELL2Q99435 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.18■■□□□ 1.78
NELL2Q99435 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NELL2Q99435 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NELL2Q99435 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NELL2Q99435 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.17■■□□□ 1.78
NELL2Q99435 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NELL2Q99435 ATP5G2P3-201ENST00000429083 425 ntBASIC26.16■■□□□ 1.78
NELL2Q99435 ECEL1P2-201ENST00000461596 1295 ntBASIC26.16■■□□□ 1.78
NELL2Q99435 AC092296.2-201ENST00000589470 999 ntBASIC26.16■■□□□ 1.78
NELL2Q99435 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NELL2Q99435 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NELL2Q99435 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NELL2Q99435 KRT18P60-201ENST00000312876 1297 ntBASIC26.15■■□□□ 1.78
NELL2Q99435 AC004987.1-201ENST00000428627 508 ntBASIC26.15■■□□□ 1.78
NELL2Q99435 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.15■■□□□ 1.78
NELL2Q99435 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NELL2Q99435 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NELL2Q99435 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NELL2Q99435 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.15■■□□□ 1.78
NELL2Q99435 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
NELL2Q99435 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
NELL2Q99435 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NELL2Q99435 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.13■■□□□ 1.77
NELL2Q99435 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.13■■□□□ 1.77
NELL2Q99435 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NELL2Q99435 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NELL2Q99435 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.12■■□□□ 1.77
NELL2Q99435 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NELL2Q99435 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.12■■□□□ 1.77
NELL2Q99435 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
NELL2Q99435 MIR219A2-201ENST00000608502 1504 ntBASIC26.12■■□□□ 1.77
NELL2Q99435 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NELL2Q99435 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
NELL2Q99435 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NELL2Q99435 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms