Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH15Q96QU1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH15Q96QU1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
PCDH15Q96QU1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PCDH15Q96QU1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH15Q96QU1 AC008813.1-201ENST00000536597 885 ntBASIC25.48■■□□□ 1.67
PCDH15Q96QU1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH15Q96QU1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH15Q96QU1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH15Q96QU1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH15Q96QU1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH15Q96QU1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.47■■□□□ 1.67
PCDH15Q96QU1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.47■■□□□ 1.67
PCDH15Q96QU1 AC135983.2-203ENST00000454486 1613 ntBASIC25.46■■□□□ 1.67
PCDH15Q96QU1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH15Q96QU1 AC060814.1-201ENST00000554326 538 ntBASIC25.45■■□□□ 1.67
PCDH15Q96QU1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDH15Q96QU1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH15Q96QU1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDH15Q96QU1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
PCDH15Q96QU1 AC148477.6-201ENST00000623746 465 ntBASIC25.45■■□□□ 1.66
PCDH15Q96QU1 WHAMMP2-203ENST00000563942 1603 ntBASIC25.45■■□□□ 1.66
PCDH15Q96QU1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH15Q96QU1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH15Q96QU1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH15Q96QU1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH15Q96QU1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH15Q96QU1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDH15Q96QU1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH15Q96QU1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH15Q96QU1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
PCDH15Q96QU1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH15Q96QU1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDH15Q96QU1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.4■■□□□ 1.66
PCDH15Q96QU1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH15Q96QU1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.39■■□□□ 1.66
PCDH15Q96QU1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDH15Q96QU1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH15Q96QU1 AC018358.1-201ENST00000631079 1402 ntBASIC25.38■■□□□ 1.65
PCDH15Q96QU1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDH15Q96QU1 AL033527.3-201ENST00000566366 1196 ntBASIC25.38■■□□□ 1.65
PCDH15Q96QU1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDH15Q96QU1 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDH15Q96QU1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH15Q96QU1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH15Q96QU1 U85056.1-201ENST00000616429 682 ntBASIC25.35■■□□□ 1.65
PCDH15Q96QU1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDH15Q96QU1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDH15Q96QU1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDH15Q96QU1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 AC092296.2-201ENST00000589470 999 ntBASIC25.34■■□□□ 1.65
PCDH15Q96QU1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH15Q96QU1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
PCDH15Q96QU1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH15Q96QU1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH15Q96QU1 KRT18P60-201ENST00000312876 1297 ntBASIC25.32■■□□□ 1.64
PCDH15Q96QU1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH15Q96QU1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PCDH15Q96QU1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDH15Q96QU1 AC127502.1-201ENST00000399971 1502 ntBASIC25.31■■□□□ 1.64
PCDH15Q96QU1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDH15Q96QU1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH15Q96QU1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH15Q96QU1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDH15Q96QU1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDH15Q96QU1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH15Q96QU1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDH15Q96QU1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
PCDH15Q96QU1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PCDH15Q96QU1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PCDH15Q96QU1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDH15Q96QU1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH15Q96QU1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH15Q96QU1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDH15Q96QU1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH15Q96QU1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH15Q96QU1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH15Q96QU1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDH15Q96QU1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PCDH15Q96QU1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH15Q96QU1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.25■■□□□ 1.63
PCDH15Q96QU1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDH15Q96QU1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDH15Q96QU1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDH15Q96QU1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms