Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CNTNAP3BQ96NU0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.83■■□□□ 1.57
CNTNAP3BQ96NU0 AC060814.1-201ENST00000554326 538 ntBASIC24.83■■□□□ 1.57
CNTNAP3BQ96NU0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.83■■□□□ 1.56
CNTNAP3BQ96NU0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CNTNAP3BQ96NU0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.82■■□□□ 1.56
CNTNAP3BQ96NU0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CNTNAP3BQ96NU0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CNTNAP3BQ96NU0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CNTNAP3BQ96NU0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CNTNAP3BQ96NU0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.81■■□□□ 1.56
CNTNAP3BQ96NU0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CNTNAP3BQ96NU0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 AC129492.7-201ENST00000622992 756 ntBASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.8■■□□□ 1.56
CNTNAP3BQ96NU0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.79■■□□□ 1.56
CNTNAP3BQ96NU0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.79■■□□□ 1.56
CNTNAP3BQ96NU0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CNTNAP3BQ96NU0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CNTNAP3BQ96NU0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.78■■□□□ 1.56
CNTNAP3BQ96NU0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CNTNAP3BQ96NU0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.76■■□□□ 1.55
CNTNAP3BQ96NU0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.75■■□□□ 1.55
CNTNAP3BQ96NU0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.74■■□□□ 1.55
CNTNAP3BQ96NU0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CNTNAP3BQ96NU0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CNTNAP3BQ96NU0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
CNTNAP3BQ96NU0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CNTNAP3BQ96NU0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 AC008406.3-201ENST00000620001 1374 ntBASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 AL356441.2-201ENST00000443009 864 ntBASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CNTNAP3BQ96NU0 KRT8P33-201ENST00000508125 1423 ntBASIC24.72■■□□□ 1.55
CNTNAP3BQ96NU0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CNTNAP3BQ96NU0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CNTNAP3BQ96NU0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNTNAP3BQ96NU0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNTNAP3BQ96NU0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNTNAP3BQ96NU0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.71■■□□□ 1.55
CNTNAP3BQ96NU0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CNTNAP3BQ96NU0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CNTNAP3BQ96NU0 RP9P-202ENST00000450133 1212 ntBASIC24.7■■□□□ 1.54
CNTNAP3BQ96NU0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CNTNAP3BQ96NU0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CNTNAP3BQ96NU0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNTNAP3BQ96NU0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.66■■□□□ 1.54
CNTNAP3BQ96NU0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CNTNAP3BQ96NU0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.66■■□□□ 1.54
CNTNAP3BQ96NU0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.66■■□□□ 1.54
CNTNAP3BQ96NU0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.66■■□□□ 1.54
CNTNAP3BQ96NU0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CNTNAP3BQ96NU0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CNTNAP3BQ96NU0 MIR638-201ENST00000385237 100 ntBASIC24.64■■□□□ 1.54
CNTNAP3BQ96NU0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.64■■□□□ 1.54
CNTNAP3BQ96NU0 AC092296.2-201ENST00000589470 999 ntBASIC24.64■■□□□ 1.54
CNTNAP3BQ96NU0 AC092666.2-201ENST00000613287 246 ntBASIC24.64■■□□□ 1.54
CNTNAP3BQ96NU0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CNTNAP3BQ96NU0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CNTNAP3BQ96NU0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CNTNAP3BQ96NU0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CNTNAP3BQ96NU0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CNTNAP3BQ96NU0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.62■■□□□ 1.53
CNTNAP3BQ96NU0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CNTNAP3BQ96NU0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CNTNAP3BQ96NU0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CNTNAP3BQ96NU0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.61■■□□□ 1.53
CNTNAP3BQ96NU0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CNTNAP3BQ96NU0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CNTNAP3BQ96NU0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CNTNAP3BQ96NU0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.6■■□□□ 1.53
CNTNAP3BQ96NU0 AC010980.1-201ENST00000587192 1142 ntBASIC24.6■■□□□ 1.53
CNTNAP3BQ96NU0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.59■■□□□ 1.53
CNTNAP3BQ96NU0 ECEL1P2-201ENST00000461596 1295 ntBASIC24.59■■□□□ 1.53
CNTNAP3BQ96NU0 BHLHE23-202ENST00000612929 1109 ntBASIC24.59■■□□□ 1.53
CNTNAP3BQ96NU0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CNTNAP3BQ96NU0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CNTNAP3BQ96NU0 AL592293.1-201ENST00000502889 1188 ntBASIC24.58■■□□□ 1.53
CNTNAP3BQ96NU0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CNTNAP3BQ96NU0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CNTNAP3BQ96NU0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CNTNAP3BQ96NU0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms