Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SPG11Q96JI7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPG11Q96JI7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPG11Q96JI7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPG11Q96JI7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPG11Q96JI7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPG11Q96JI7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.14■■□□□ 1.13
SPG11Q96JI7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPG11Q96JI7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPG11Q96JI7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPG11Q96JI7 AC148477.6-201ENST00000623746 465 ntBASIC22.13■■□□□ 1.13
SPG11Q96JI7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPG11Q96JI7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPG11Q96JI7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.12■■□□□ 1.13
SPG11Q96JI7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SPG11Q96JI7 ATP5G2P3-201ENST00000429083 425 ntBASIC22.11■■□□□ 1.13
SPG11Q96JI7 AL035685.1-201ENST00000636663 812 ntBASIC22.11■■□□□ 1.13
SPG11Q96JI7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPG11Q96JI7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.11■■□□□ 1.13
SPG11Q96JI7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SPG11Q96JI7 AC004987.1-201ENST00000428627 508 ntBASIC22.11■■□□□ 1.13
SPG11Q96JI7 AL592295.1-201ENST00000400984 884 ntBASIC22.1■■□□□ 1.13
SPG11Q96JI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SPG11Q96JI7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPG11Q96JI7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SPG11Q96JI7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SPG11Q96JI7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.08■■□□□ 1.13
SPG11Q96JI7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SPG11Q96JI7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SPG11Q96JI7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SPG11Q96JI7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.08■■□□□ 1.12
SPG11Q96JI7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.08■■□□□ 1.12
SPG11Q96JI7 U85056.1-201ENST00000616429 682 ntBASIC22.08■■□□□ 1.12
SPG11Q96JI7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.07■■□□□ 1.12
SPG11Q96JI7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPG11Q96JI7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.07■■□□□ 1.12
SPG11Q96JI7 AC092296.2-201ENST00000589470 999 ntBASIC22.06■■□□□ 1.12
SPG11Q96JI7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPG11Q96JI7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SPG11Q96JI7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPG11Q96JI7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPG11Q96JI7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.05■■□□□ 1.12
SPG11Q96JI7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPG11Q96JI7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPG11Q96JI7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.04■■□□□ 1.12
SPG11Q96JI7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPG11Q96JI7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.03■■□□□ 1.12
SPG11Q96JI7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPG11Q96JI7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.03■■□□□ 1.12
SPG11Q96JI7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPG11Q96JI7 AC120057.4-201ENST00000624722 1615 ntBASIC22.02■■□□□ 1.12
SPG11Q96JI7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPG11Q96JI7 AL161658.1-201ENST00000623641 1967 ntBASIC22.02■■□□□ 1.11
SPG11Q96JI7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SPG11Q96JI7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPG11Q96JI7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22■■□□□ 1.11
SPG11Q96JI7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPG11Q96JI7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SPG11Q96JI7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPG11Q96JI7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPG11Q96JI7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPG11Q96JI7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPG11Q96JI7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPG11Q96JI7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.98■■□□□ 1.11
SPG11Q96JI7 AL451085.2-201ENST00000605085 799 ntBASIC21.98■■□□□ 1.11
SPG11Q96JI7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPG11Q96JI7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPG11Q96JI7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.98■■□□□ 1.11
SPG11Q96JI7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
SPG11Q96JI7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.97■■□□□ 1.11
SPG11Q96JI7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPG11Q96JI7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SPG11Q96JI7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPG11Q96JI7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
SPG11Q96JI7 WHAMMP2-203ENST00000563942 1603 ntBASIC21.96■■□□□ 1.11
SPG11Q96JI7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPG11Q96JI7 AC010864.1-201ENST00000609407 1511 ntBASIC21.96■■□□□ 1.11
SPG11Q96JI7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.96■■□□□ 1.11
SPG11Q96JI7 AC135983.2-203ENST00000454486 1613 ntBASIC21.95■■□□□ 1.11
SPG11Q96JI7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SPG11Q96JI7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.95■■□□□ 1.1
SPG11Q96JI7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SPG11Q96JI7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPG11Q96JI7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPG11Q96JI7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPG11Q96JI7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.94■■□□□ 1.1
SPG11Q96JI7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPG11Q96JI7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPG11Q96JI7 MIR219A2-201ENST00000608502 1504 ntBASIC21.93■■□□□ 1.1
SPG11Q96JI7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPG11Q96JI7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.92■■□□□ 1.1
SPG11Q96JI7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.92■■□□□ 1.1
SPG11Q96JI7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPG11Q96JI7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms