Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF183Q96D59 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF183Q96D59 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF183Q96D59 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF183Q96D59 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF183Q96D59 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF183Q96D59 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF183Q96D59 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF183Q96D59 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF183Q96D59 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF183Q96D59 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF183Q96D59 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RNF183Q96D59 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF183Q96D59 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF183Q96D59 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RNF183Q96D59 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF183Q96D59 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF183Q96D59 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF183Q96D59 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF183Q96D59 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF183Q96D59 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF183Q96D59 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 AC135983.2-203ENST00000454486 1613 ntBASIC18.74■□□□□ 0.59
RNF183Q96D59 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF183Q96D59 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF183Q96D59 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF183Q96D59 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF183Q96D59 ABCB10P3-201ENST00000561950 2166 ntBASIC18.72■□□□□ 0.59
RNF183Q96D59 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF183Q96D59 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF183Q96D59 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF183Q96D59 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF183Q96D59 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF183Q96D59 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 WHAMMP2-203ENST00000563942 1603 ntBASIC18.71■□□□□ 0.58
RNF183Q96D59 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 ST7-AS1-201ENST00000456775 1889 ntBASIC18.69■□□□□ 0.58
RNF183Q96D59 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF183Q96D59 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF183Q96D59 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF183Q96D59 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF183Q96D59 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF183Q96D59 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF183Q96D59 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF183Q96D59 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 ABCB10P1-201ENST00000614297 2181 ntBASIC18.66■□□□□ 0.58
RNF183Q96D59 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF183Q96D59 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF183Q96D59 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF183Q96D59 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.65■□□□□ 0.58
RNF183Q96D59 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF183Q96D59 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF183Q96D59 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF183Q96D59 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF183Q96D59 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF183Q96D59 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms