Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhga6Q91XY2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga6Q91XY2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga6Q91XY2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.31■■□□□ 1.32
Pcdhga6Q91XY2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga6Q91XY2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Pcdhga6Q91XY2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.3■■□□□ 1.32
Pcdhga6Q91XY2 Gm7332-201ENSMUST00000118351 454 ntBASIC23.29■■□□□ 1.32
Pcdhga6Q91XY2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhga6Q91XY2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhga6Q91XY2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Pcdhga6Q91XY2 Gm16437-201ENSMUST00000025669 507 ntBASIC23.28■■□□□ 1.32
Pcdhga6Q91XY2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.28■■□□□ 1.32
Pcdhga6Q91XY2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhga6Q91XY2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga6Q91XY2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.27■■□□□ 1.32
Pcdhga6Q91XY2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga6Q91XY2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga6Q91XY2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhga6Q91XY2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdhga6Q91XY2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.25■■□□□ 1.31
Pcdhga6Q91XY2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhga6Q91XY2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhga6Q91XY2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.25■■□□□ 1.31
Pcdhga6Q91XY2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga6Q91XY2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.24■■□□□ 1.31
Pcdhga6Q91XY2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga6Q91XY2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.23■■□□□ 1.31
Pcdhga6Q91XY2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.23■■□□□ 1.31
Pcdhga6Q91XY2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdhga6Q91XY2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga6Q91XY2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga6Q91XY2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga6Q91XY2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga6Q91XY2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdhga6Q91XY2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhga6Q91XY2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhga6Q91XY2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhga6Q91XY2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Pcdhga6Q91XY2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhga6Q91XY2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga6Q91XY2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga6Q91XY2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.19■■□□□ 1.3
Pcdhga6Q91XY2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga6Q91XY2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga6Q91XY2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdhga6Q91XY2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.18■■□□□ 1.3
Pcdhga6Q91XY2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga6Q91XY2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhga6Q91XY2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
Pcdhga6Q91XY2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga6Q91XY2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga6Q91XY2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.16■■□□□ 1.3
Pcdhga6Q91XY2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.16■■□□□ 1.3
Pcdhga6Q91XY2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga6Q91XY2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdhga6Q91XY2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhga6Q91XY2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhga6Q91XY2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhga6Q91XY2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhga6Q91XY2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhga6Q91XY2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhga6Q91XY2 Gm22567-201ENSMUST00000175542 342 ntBASIC23.12■■□□□ 1.29
Pcdhga6Q91XY2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.12■■□□□ 1.29
Pcdhga6Q91XY2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga6Q91XY2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
Pcdhga6Q91XY2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga6Q91XY2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
Pcdhga6Q91XY2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhga6Q91XY2 Gm27502-201ENSMUST00000183495 199 ntBASIC23.09■■□□□ 1.29
Pcdhga6Q91XY2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.09■■□□□ 1.29
Pcdhga6Q91XY2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhga6Q91XY2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhga6Q91XY2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga6Q91XY2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga6Q91XY2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhga6Q91XY2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga6Q91XY2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga6Q91XY2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga6Q91XY2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhga6Q91XY2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga6Q91XY2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga6Q91XY2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga6Q91XY2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhga6Q91XY2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhga6Q91XY2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga6Q91XY2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Pcdhga6Q91XY2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga6Q91XY2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga6Q91XY2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga6Q91XY2 Gm5812-201ENSMUST00000061073 957 ntBASIC23.01■■□□□ 1.27
Pcdhga6Q91XY2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga6Q91XY2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga6Q91XY2 Gm14523-201ENSMUST00000117260 558 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms