Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb17Q91VD8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb17Q91VD8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb17Q91VD8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb17Q91VD8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb17Q91VD8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb17Q91VD8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Pcdhb17Q91VD8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb17Q91VD8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.43■■□□□ 1.5
Pcdhb17Q91VD8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Pcdhb17Q91VD8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Particl-201ENSMUST00000205370 1560 ntBASIC24.41■■□□□ 1.5
Pcdhb17Q91VD8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Pcdhb17Q91VD8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb17Q91VD8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.39■■□□□ 1.49
Pcdhb17Q91VD8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.39■■□□□ 1.49
Pcdhb17Q91VD8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb17Q91VD8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 Gm7432-201ENSMUST00000210343 879 ntBASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb17Q91VD8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb17Q91VD8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb17Q91VD8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb17Q91VD8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb17Q91VD8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.34■■□□□ 1.49
Pcdhb17Q91VD8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb17Q91VD8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.34■■□□□ 1.49
Pcdhb17Q91VD8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb17Q91VD8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb17Q91VD8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb17Q91VD8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.33■■□□□ 1.49
Pcdhb17Q91VD8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb17Q91VD8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb17Q91VD8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Pcdhb17Q91VD8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhb17Q91VD8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhb17Q91VD8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb17Q91VD8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Pcdhb17Q91VD8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb17Q91VD8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb17Q91VD8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb17Q91VD8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.28■■□□□ 1.48
Pcdhb17Q91VD8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb17Q91VD8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Pcdhb17Q91VD8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdhb17Q91VD8 Gm37136-201ENSMUST00000194368 194 ntBASIC24.27■■□□□ 1.48
Pcdhb17Q91VD8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb17Q91VD8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb17Q91VD8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb17Q91VD8 Gm11599-201ENSMUST00000118720 878 ntBASIC24.25■■□□□ 1.47
Pcdhb17Q91VD8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb17Q91VD8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb17Q91VD8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb17Q91VD8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb17Q91VD8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb17Q91VD8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb17Q91VD8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb17Q91VD8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Pcdhb17Q91VD8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhb17Q91VD8 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.21■■□□□ 1.47
Pcdhb17Q91VD8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Pcdhb17Q91VD8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb17Q91VD8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb17Q91VD8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb17Q91VD8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb17Q91VD8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb17Q91VD8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb17Q91VD8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb17Q91VD8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.15■■□□□ 1.46
Pcdhb17Q91VD8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb17Q91VD8 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.14■■□□□ 1.45
Pcdhb17Q91VD8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb17Q91VD8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb17Q91VD8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb17Q91VD8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb17Q91VD8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb17Q91VD8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdhb17Q91VD8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms