Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg4Q8VHY0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg4Q8VHY0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg4Q8VHY0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.79■□□□□ 0.92
Cspg4Q8VHY0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.79■□□□□ 0.92
Cspg4Q8VHY0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cspg4Q8VHY0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg4Q8VHY0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.78■□□□□ 0.92
Cspg4Q8VHY0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg4Q8VHY0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cspg4Q8VHY0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg4Q8VHY0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg4Q8VHY0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cspg4Q8VHY0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.76■□□□□ 0.91
Cspg4Q8VHY0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Cspg4Q8VHY0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.75■□□□□ 0.91
Cspg4Q8VHY0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg4Q8VHY0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg4Q8VHY0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.75■□□□□ 0.91
Cspg4Q8VHY0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.74■□□□□ 0.91
Cspg4Q8VHY0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cspg4Q8VHY0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.73■□□□□ 0.91
Cspg4Q8VHY0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.73■□□□□ 0.91
Cspg4Q8VHY0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cspg4Q8VHY0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cspg4Q8VHY0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cspg4Q8VHY0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cspg4Q8VHY0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cspg4Q8VHY0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cspg4Q8VHY0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.72■□□□□ 0.91
Cspg4Q8VHY0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cspg4Q8VHY0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cspg4Q8VHY0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cspg4Q8VHY0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cspg4Q8VHY0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cspg4Q8VHY0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cspg4Q8VHY0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cspg4Q8VHY0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.69■□□□□ 0.9
Cspg4Q8VHY0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cspg4Q8VHY0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.68■□□□□ 0.9
Cspg4Q8VHY0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cspg4Q8VHY0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cspg4Q8VHY0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.67■□□□□ 0.9
Cspg4Q8VHY0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cspg4Q8VHY0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cspg4Q8VHY0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.66■□□□□ 0.9
Cspg4Q8VHY0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.65■□□□□ 0.9
Cspg4Q8VHY0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cspg4Q8VHY0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Cspg4Q8VHY0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.65■□□□□ 0.9
Cspg4Q8VHY0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cspg4Q8VHY0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cspg4Q8VHY0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cspg4Q8VHY0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cspg4Q8VHY0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg4Q8VHY0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg4Q8VHY0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg4Q8VHY0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.61■□□□□ 0.89
Cspg4Q8VHY0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg4Q8VHY0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg4Q8VHY0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg4Q8VHY0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg4Q8VHY0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.6■□□□□ 0.89
Cspg4Q8VHY0 Serp2-204ENSMUST00000228055 705 ntBASIC20.6■□□□□ 0.89
Cspg4Q8VHY0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cspg4Q8VHY0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.59■□□□□ 0.89
Cspg4Q8VHY0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.59■□□□□ 0.89
Cspg4Q8VHY0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Cspg4Q8VHY0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg4Q8VHY0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg4Q8VHY0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.57■□□□□ 0.88
Cspg4Q8VHY0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg4Q8VHY0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Cspg4Q8VHY0 Gm27502-201ENSMUST00000183495 199 ntBASIC20.56■□□□□ 0.88
Cspg4Q8VHY0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.56■□□□□ 0.88
Cspg4Q8VHY0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg4Q8VHY0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg4Q8VHY0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg4Q8VHY0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg4Q8VHY0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg4Q8VHY0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg4Q8VHY0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.55■□□□□ 0.88
Cspg4Q8VHY0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 Rps24-207ENSMUST00000224568 714 ntBASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg4Q8VHY0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.53■□□□□ 0.88
Cspg4Q8VHY0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg4Q8VHY0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cspg4Q8VHY0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cspg4Q8VHY0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cspg4Q8VHY0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cspg4Q8VHY0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms