Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cdhr1Q8VHP6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
Cdhr1Q8VHP6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdhr1Q8VHP6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdhr1Q8VHP6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.1■■□□□ 1.29
Cdhr1Q8VHP6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdhr1Q8VHP6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdhr1Q8VHP6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdhr1Q8VHP6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdhr1Q8VHP6 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.08■■□□□ 1.29
Cdhr1Q8VHP6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.08■■□□□ 1.28
Cdhr1Q8VHP6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdhr1Q8VHP6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdhr1Q8VHP6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.05■■□□□ 1.28
Cdhr1Q8VHP6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Cdhr1Q8VHP6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.04■■□□□ 1.28
Cdhr1Q8VHP6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdhr1Q8VHP6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdhr1Q8VHP6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cdhr1Q8VHP6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdhr1Q8VHP6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdhr1Q8VHP6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Cdhr1Q8VHP6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdhr1Q8VHP6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cdhr1Q8VHP6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdhr1Q8VHP6 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.97■■□□□ 1.27
Cdhr1Q8VHP6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cdhr1Q8VHP6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Cdhr1Q8VHP6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cdhr1Q8VHP6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr1Q8VHP6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdhr1Q8VHP6 Gm37136-201ENSMUST00000194368 194 ntBASIC22.94■■□□□ 1.26
Cdhr1Q8VHP6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Cdhr1Q8VHP6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.94■■□□□ 1.26
Cdhr1Q8VHP6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.93■■□□□ 1.26
Cdhr1Q8VHP6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr1Q8VHP6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdhr1Q8VHP6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Cdhr1Q8VHP6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.91■■□□□ 1.26
Cdhr1Q8VHP6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cdhr1Q8VHP6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cdhr1Q8VHP6 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.89■■□□□ 1.25
Cdhr1Q8VHP6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cdhr1Q8VHP6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cdhr1Q8VHP6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Cdhr1Q8VHP6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cdhr1Q8VHP6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cdhr1Q8VHP6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Mir3960-201ENSMUST00000198213 73 ntBASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdhr1Q8VHP6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Scarna2-201ENSMUST00000157560 414 ntBASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr1Q8VHP6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdhr1Q8VHP6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.85■■□□□ 1.25
Cdhr1Q8VHP6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdhr1Q8VHP6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdhr1Q8VHP6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.85■■□□□ 1.25
Cdhr1Q8VHP6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdhr1Q8VHP6 Gm45364-201ENSMUST00000210883 159 ntBASIC22.83■■□□□ 1.25
Cdhr1Q8VHP6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cdhr1Q8VHP6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cdhr1Q8VHP6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cdhr1Q8VHP6 Gm9806-201ENSMUST00000051080 552 ntBASIC22.82■■□□□ 1.24
Cdhr1Q8VHP6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr1Q8VHP6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Cdhr1Q8VHP6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Cdhr1Q8VHP6 Gm11687-201ENSMUST00000118911 886 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms