Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.23■■□□□ 1.47
Sh3kbp1Q8R550 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3kbp1Q8R550 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3kbp1Q8R550 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3kbp1Q8R550 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3kbp1Q8R550 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Sh3kbp1Q8R550 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3kbp1Q8R550 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3kbp1Q8R550 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.18■■□□□ 1.46
Sh3kbp1Q8R550 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3kbp1Q8R550 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3kbp1Q8R550 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Sh3kbp1Q8R550 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.17■■□□□ 1.46
Sh3kbp1Q8R550 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3kbp1Q8R550 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3kbp1Q8R550 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sh3kbp1Q8R550 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Sh3kbp1Q8R550 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3kbp1Q8R550 Gm30023-201ENSMUST00000197970 889 ntBASIC24.14■■□□□ 1.45
Sh3kbp1Q8R550 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3kbp1Q8R550 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3kbp1Q8R550 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3kbp1Q8R550 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.12■■□□□ 1.45
Sh3kbp1Q8R550 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sh3kbp1Q8R550 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3kbp1Q8R550 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Sh3kbp1Q8R550 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Sh3kbp1Q8R550 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.11■■□□□ 1.45
Sh3kbp1Q8R550 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3kbp1Q8R550 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3kbp1Q8R550 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3kbp1Q8R550 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3kbp1Q8R550 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3kbp1Q8R550 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Sh3kbp1Q8R550 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.09■■□□□ 1.45
Sh3kbp1Q8R550 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.09■■□□□ 1.45
Sh3kbp1Q8R550 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Sh3kbp1Q8R550 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Sh3kbp1Q8R550 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
Sh3kbp1Q8R550 Gm11175-201ENSMUST00000116172 543 ntBASIC24.07■■□□□ 1.44
Sh3kbp1Q8R550 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sh3kbp1Q8R550 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sh3kbp1Q8R550 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sh3kbp1Q8R550 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sh3kbp1Q8R550 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sh3kbp1Q8R550 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Sh3kbp1Q8R550 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Sh3kbp1Q8R550 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Sh3kbp1Q8R550 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sh3kbp1Q8R550 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Sh3kbp1Q8R550 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Sh3kbp1Q8R550 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.03■■□□□ 1.44
Sh3kbp1Q8R550 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sh3kbp1Q8R550 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3kbp1Q8R550 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Sh3kbp1Q8R550 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3kbp1Q8R550 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3kbp1Q8R550 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3kbp1Q8R550 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sh3kbp1Q8R550 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24■■□□□ 1.43
Sh3kbp1Q8R550 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sh3kbp1Q8R550 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sh3kbp1Q8R550 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24■■□□□ 1.43
Sh3kbp1Q8R550 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Sh3kbp1Q8R550 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3kbp1Q8R550 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.98■■□□□ 1.43
Sh3kbp1Q8R550 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3kbp1Q8R550 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3kbp1Q8R550 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sh3kbp1Q8R550 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sh3kbp1Q8R550 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Sh3kbp1Q8R550 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sh3kbp1Q8R550 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.43
Sh3kbp1Q8R550 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 Mir6538-201ENSMUST00000183713 110 ntBASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 Particl-201ENSMUST00000205370 1560 ntBASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sh3kbp1Q8R550 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sh3kbp1Q8R550 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sh3kbp1Q8R550 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sh3kbp1Q8R550 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms