Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cuedc1Q8R3V6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cuedc1Q8R3V6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cuedc1Q8R3V6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cuedc1Q8R3V6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Cuedc1Q8R3V6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cuedc1Q8R3V6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cuedc1Q8R3V6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.1■□□□□ 0.97
Cuedc1Q8R3V6 Particl-201ENSMUST00000205370 1560 ntBASIC21.1■□□□□ 0.97
Cuedc1Q8R3V6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cuedc1Q8R3V6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cuedc1Q8R3V6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cuedc1Q8R3V6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cuedc1Q8R3V6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cuedc1Q8R3V6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.09■□□□□ 0.97
Cuedc1Q8R3V6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cuedc1Q8R3V6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cuedc1Q8R3V6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cuedc1Q8R3V6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cuedc1Q8R3V6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cuedc1Q8R3V6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cuedc1Q8R3V6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.07■□□□□ 0.96
Cuedc1Q8R3V6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.06■□□□□ 0.96
Cuedc1Q8R3V6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cuedc1Q8R3V6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cuedc1Q8R3V6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cuedc1Q8R3V6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cuedc1Q8R3V6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cuedc1Q8R3V6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cuedc1Q8R3V6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cuedc1Q8R3V6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cuedc1Q8R3V6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cuedc1Q8R3V6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cuedc1Q8R3V6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cuedc1Q8R3V6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cuedc1Q8R3V6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.01■□□□□ 0.95
Cuedc1Q8R3V6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cuedc1Q8R3V6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cuedc1Q8R3V6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cuedc1Q8R3V6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cuedc1Q8R3V6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.99■□□□□ 0.95
Cuedc1Q8R3V6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cuedc1Q8R3V6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cuedc1Q8R3V6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cuedc1Q8R3V6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Gm12366-201ENSMUST00000121722 873 ntBASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Gm5786-201ENSMUST00000085368 882 ntBASIC20.97■□□□□ 0.95
Cuedc1Q8R3V6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cuedc1Q8R3V6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.96■□□□□ 0.95
Cuedc1Q8R3V6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.96■□□□□ 0.95
Cuedc1Q8R3V6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cuedc1Q8R3V6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.95■□□□□ 0.94
Cuedc1Q8R3V6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.95■□□□□ 0.94
Cuedc1Q8R3V6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cuedc1Q8R3V6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cuedc1Q8R3V6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cuedc1Q8R3V6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cuedc1Q8R3V6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cuedc1Q8R3V6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cuedc1Q8R3V6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cuedc1Q8R3V6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cuedc1Q8R3V6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cuedc1Q8R3V6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Cuedc1Q8R3V6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cuedc1Q8R3V6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cuedc1Q8R3V6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cuedc1Q8R3V6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms