Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pdlim2Q8R1G6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pdlim2Q8R1G6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.63■■■□□ 2.01
Pdlim2Q8R1G6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC27.63■■■□□ 2.01
Pdlim2Q8R1G6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pdlim2Q8R1G6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pdlim2Q8R1G6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Pdlim2Q8R1G6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pdlim2Q8R1G6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pdlim2Q8R1G6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pdlim2Q8R1G6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pdlim2Q8R1G6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pdlim2Q8R1G6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pdlim2Q8R1G6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pdlim2Q8R1G6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Pdlim2Q8R1G6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pdlim2Q8R1G6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pdlim2Q8R1G6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Pdlim2Q8R1G6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pdlim2Q8R1G6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pdlim2Q8R1G6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pdlim2Q8R1G6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pdlim2Q8R1G6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pdlim2Q8R1G6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pdlim2Q8R1G6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pdlim2Q8R1G6 Gm6277-202ENSMUST00000224036 2779 ntBASIC27.52■■■□□ 2
Pdlim2Q8R1G6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Pdlim2Q8R1G6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.51■■□□□ 1.99
Pdlim2Q8R1G6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Pdlim2Q8R1G6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pdlim2Q8R1G6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pdlim2Q8R1G6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Pdlim2Q8R1G6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Pdlim2Q8R1G6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Pdlim2Q8R1G6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Pdlim2Q8R1G6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC27.49■■□□□ 1.99
Pdlim2Q8R1G6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Pdlim2Q8R1G6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pdlim2Q8R1G6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Pdlim2Q8R1G6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pdlim2Q8R1G6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pdlim2Q8R1G6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pdlim2Q8R1G6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Pdlim2Q8R1G6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pdlim2Q8R1G6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.46■■□□□ 1.99
Pdlim2Q8R1G6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pdlim2Q8R1G6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pdlim2Q8R1G6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pdlim2Q8R1G6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pdlim2Q8R1G6 Gm13042-201ENSMUST00000119244 1955 ntBASIC27.44■■□□□ 1.98
Pdlim2Q8R1G6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pdlim2Q8R1G6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Pdlim2Q8R1G6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pdlim2Q8R1G6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pdlim2Q8R1G6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pdlim2Q8R1G6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pdlim2Q8R1G6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pdlim2Q8R1G6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pdlim2Q8R1G6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pdlim2Q8R1G6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Pdlim2Q8R1G6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Pdlim2Q8R1G6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
Pdlim2Q8R1G6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.38■■□□□ 1.97
Pdlim2Q8R1G6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Pdlim2Q8R1G6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pdlim2Q8R1G6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
Pdlim2Q8R1G6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pdlim2Q8R1G6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pdlim2Q8R1G6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pdlim2Q8R1G6 Dmtn-209ENSMUST00000228295 2572 ntBASIC27.36■■□□□ 1.97
Pdlim2Q8R1G6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pdlim2Q8R1G6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Pdlim2Q8R1G6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Pdlim2Q8R1G6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Pdlim2Q8R1G6 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.35■■□□□ 1.97
Pdlim2Q8R1G6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pdlim2Q8R1G6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Pdlim2Q8R1G6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pdlim2Q8R1G6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pdlim2Q8R1G6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.33■■□□□ 1.97
Pdlim2Q8R1G6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pdlim2Q8R1G6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pdlim2Q8R1G6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pdlim2Q8R1G6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pdlim2Q8R1G6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pdlim2Q8R1G6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
Pdlim2Q8R1G6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pdlim2Q8R1G6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms