Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.18■■□□□ 1.94
SMRP1Q8NCR6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMRP1Q8NCR6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SMRP1Q8NCR6 AC060814.1-201ENST00000554326 538 ntBASIC27.17■■□□□ 1.94
SMRP1Q8NCR6 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.17■■□□□ 1.94
SMRP1Q8NCR6 TSPY13P-201ENST00000338964 914 ntBASIC27.16■■□□□ 1.94
SMRP1Q8NCR6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SMRP1Q8NCR6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMRP1Q8NCR6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMRP1Q8NCR6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
SMRP1Q8NCR6 AL161658.1-201ENST00000623641 1967 ntBASIC27.15■■□□□ 1.94
SMRP1Q8NCR6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SMRP1Q8NCR6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.14■■□□□ 1.94
SMRP1Q8NCR6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.14■■□□□ 1.94
SMRP1Q8NCR6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.14■■□□□ 1.94
SMRP1Q8NCR6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMRP1Q8NCR6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMRP1Q8NCR6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMRP1Q8NCR6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMRP1Q8NCR6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMRP1Q8NCR6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.11■■□□□ 1.93
SMRP1Q8NCR6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SMRP1Q8NCR6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 KRT18P60-201ENST00000312876 1297 ntBASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 AC148477.6-201ENST00000623746 465 ntBASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMRP1Q8NCR6 AC004987.1-201ENST00000428627 508 ntBASIC27.09■■□□□ 1.93
SMRP1Q8NCR6 ATP5G2P3-201ENST00000429083 425 ntBASIC27.09■■□□□ 1.93
SMRP1Q8NCR6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.09■■□□□ 1.93
SMRP1Q8NCR6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMRP1Q8NCR6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.92
SMRP1Q8NCR6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SMRP1Q8NCR6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 AC135983.2-203ENST00000454486 1613 ntBASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 RARRES2P1-201ENST00000474487 481 ntBASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SMRP1Q8NCR6 WHAMMP2-203ENST00000563942 1603 ntBASIC27.05■■□□□ 1.92
SMRP1Q8NCR6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMRP1Q8NCR6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMRP1Q8NCR6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.05■■□□□ 1.92
SMRP1Q8NCR6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.04■■□□□ 1.92
SMRP1Q8NCR6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMRP1Q8NCR6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.04■■□□□ 1.92
SMRP1Q8NCR6 AC092296.2-201ENST00000589470 999 ntBASIC27.04■■□□□ 1.92
SMRP1Q8NCR6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMRP1Q8NCR6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.03■■□□□ 1.92
SMRP1Q8NCR6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
SMRP1Q8NCR6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
SMRP1Q8NCR6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.02■■□□□ 1.92
SMRP1Q8NCR6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SMRP1Q8NCR6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.02■■□□□ 1.92
SMRP1Q8NCR6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27■■□□□ 1.91
SMRP1Q8NCR6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27■■□□□ 1.91
SMRP1Q8NCR6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27■■□□□ 1.91
SMRP1Q8NCR6 AC110285.7-201ENST00000624417 1536 ntBASIC27■■□□□ 1.91
SMRP1Q8NCR6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.99■■□□□ 1.91
SMRP1Q8NCR6 AC127502.1-201ENST00000399971 1502 ntBASIC26.99■■□□□ 1.91
SMRP1Q8NCR6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
SMRP1Q8NCR6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.98■■□□□ 1.91
SMRP1Q8NCR6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMRP1Q8NCR6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMRP1Q8NCR6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMRP1Q8NCR6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMRP1Q8NCR6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.96■■□□□ 1.91
SMRP1Q8NCR6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.96■■□□□ 1.91
SMRP1Q8NCR6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SMRP1Q8NCR6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMRP1Q8NCR6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMRP1Q8NCR6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SMRP1Q8NCR6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 ECEL1P2-201ENST00000461596 1295 ntBASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 MIR219A2-201ENST00000608502 1504 ntBASIC26.94■■□□□ 1.9
SMRP1Q8NCR6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SMRP1Q8NCR6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.93■■□□□ 1.9
SMRP1Q8NCR6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SMRP1Q8NCR6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SMRP1Q8NCR6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMRP1Q8NCR6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SMRP1Q8NCR6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SMRP1Q8NCR6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SMRP1Q8NCR6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms