Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CPSF7Q8N684 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPSF7Q8N684 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CPSF7Q8N684 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF7Q8N684 AP004833.2-201ENST00000532228 1454 ntBASIC24.96■■□□□ 1.59
CPSF7Q8N684 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF7Q8N684 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF7Q8N684 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.96■■□□□ 1.59
CPSF7Q8N684 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF7Q8N684 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF7Q8N684 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CPSF7Q8N684 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF7Q8N684 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CPSF7Q8N684 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CPSF7Q8N684 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.95■■□□□ 1.58
CPSF7Q8N684 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CPSF7Q8N684 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.94■■□□□ 1.58
CPSF7Q8N684 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF7Q8N684 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF7Q8N684 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF7Q8N684 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF7Q8N684 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF7Q8N684 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF7Q8N684 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.93■■□□□ 1.58
CPSF7Q8N684 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF7Q8N684 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPSF7Q8N684 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPSF7Q8N684 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.91■■□□□ 1.58
CPSF7Q8N684 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CPSF7Q8N684 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.91■■□□□ 1.58
CPSF7Q8N684 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPSF7Q8N684 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.9■■□□□ 1.58
CPSF7Q8N684 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.9■■□□□ 1.58
CPSF7Q8N684 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPSF7Q8N684 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPSF7Q8N684 MIR762-201ENST00000390236 83 ntBASIC24.89■■□□□ 1.58
CPSF7Q8N684 MIR3665-201ENST00000578708 105 ntBASIC24.89■■□□□ 1.58
CPSF7Q8N684 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPSF7Q8N684 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CPSF7Q8N684 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.88■■□□□ 1.57
CPSF7Q8N684 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPSF7Q8N684 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.88■■□□□ 1.57
CPSF7Q8N684 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.88■■□□□ 1.57
CPSF7Q8N684 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPSF7Q8N684 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.87■■□□□ 1.57
CPSF7Q8N684 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CPSF7Q8N684 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPSF7Q8N684 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPSF7Q8N684 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CPSF7Q8N684 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.85■■□□□ 1.57
CPSF7Q8N684 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CPSF7Q8N684 DUX4L28-201ENST00000623687 678 ntBASIC24.85■■□□□ 1.57
CPSF7Q8N684 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CPSF7Q8N684 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CPSF7Q8N684 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF7Q8N684 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF7Q8N684 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPSF7Q8N684 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
CPSF7Q8N684 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPSF7Q8N684 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
CPSF7Q8N684 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.83■■□□□ 1.57
CPSF7Q8N684 LINC01003-201ENST00000564834 1764 ntBASIC24.82■■□□□ 1.56
CPSF7Q8N684 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.82■■□□□ 1.56
CPSF7Q8N684 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CPSF7Q8N684 AC005559.1-201ENST00000589661 871 ntBASIC24.82■■□□□ 1.56
CPSF7Q8N684 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.82■■□□□ 1.56
CPSF7Q8N684 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPSF7Q8N684 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPSF7Q8N684 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CPSF7Q8N684 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPSF7Q8N684 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.81■■□□□ 1.56
CPSF7Q8N684 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
CPSF7Q8N684 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
CPSF7Q8N684 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CPSF7Q8N684 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CPSF7Q8N684 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPSF7Q8N684 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CPSF7Q8N684 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CPSF7Q8N684 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPSF7Q8N684 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CPSF7Q8N684 AC087741.3-201ENST00000624270 1347 ntBASIC24.79■■□□□ 1.56
CPSF7Q8N684 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.79■■□□□ 1.56
CPSF7Q8N684 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.79■■□□□ 1.56
CPSF7Q8N684 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPSF7Q8N684 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.78■■□□□ 1.56
CPSF7Q8N684 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CPSF7Q8N684 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPSF7Q8N684 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPSF7Q8N684 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPSF7Q8N684 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPSF7Q8N684 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.76■■□□□ 1.55
CPSF7Q8N684 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPSF7Q8N684 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPSF7Q8N684 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPSF7Q8N684 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.76■■□□□ 1.55
CPSF7Q8N684 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPSF7Q8N684 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF7Q8N684 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF7Q8N684 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms