Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 NTF6A-201ENST00000591175 560 ntBASIC24.77■■□□□ 1.56
COL27A1Q8IZC6 AC127502.1-201ENST00000399971 1502 ntBASIC24.76■■□□□ 1.55
COL27A1Q8IZC6 AC060814.1-201ENST00000554326 538 ntBASIC24.75■■□□□ 1.55
COL27A1Q8IZC6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL27A1Q8IZC6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
COL27A1Q8IZC6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL27A1Q8IZC6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
COL27A1Q8IZC6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL27A1Q8IZC6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.74■■□□□ 1.55
COL27A1Q8IZC6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL27A1Q8IZC6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
COL27A1Q8IZC6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.73■■□□□ 1.55
COL27A1Q8IZC6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.73■■□□□ 1.55
COL27A1Q8IZC6 AC008813.1-201ENST00000536597 885 ntBASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL27A1Q8IZC6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL27A1Q8IZC6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
COL27A1Q8IZC6 AC022413.1-201ENST00000624602 984 ntBASIC24.71■■□□□ 1.55
COL27A1Q8IZC6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL27A1Q8IZC6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
COL27A1Q8IZC6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL27A1Q8IZC6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.7■■□□□ 1.54
COL27A1Q8IZC6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.7■■□□□ 1.54
COL27A1Q8IZC6 AC012354.3-201ENST00000623734 483 ntBASIC24.7■■□□□ 1.54
COL27A1Q8IZC6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL27A1Q8IZC6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
COL27A1Q8IZC6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL27A1Q8IZC6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
COL27A1Q8IZC6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.68■■□□□ 1.54
COL27A1Q8IZC6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL27A1Q8IZC6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
COL27A1Q8IZC6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
COL27A1Q8IZC6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL27A1Q8IZC6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL27A1Q8IZC6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL27A1Q8IZC6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL27A1Q8IZC6 AL135925.1-201ENST00000605920 1701 ntBASIC24.67■■□□□ 1.54
COL27A1Q8IZC6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.67■■□□□ 1.54
COL27A1Q8IZC6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL27A1Q8IZC6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL27A1Q8IZC6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
COL27A1Q8IZC6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL27A1Q8IZC6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.65■■□□□ 1.54
COL27A1Q8IZC6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL27A1Q8IZC6 AC092296.2-201ENST00000589470 999 ntBASIC24.64■■□□□ 1.54
COL27A1Q8IZC6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL27A1Q8IZC6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL27A1Q8IZC6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL27A1Q8IZC6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL27A1Q8IZC6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL27A1Q8IZC6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.63■■□□□ 1.53
COL27A1Q8IZC6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.62■■□□□ 1.53
COL27A1Q8IZC6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL27A1Q8IZC6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
COL27A1Q8IZC6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL27A1Q8IZC6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL27A1Q8IZC6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
COL27A1Q8IZC6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
COL27A1Q8IZC6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL27A1Q8IZC6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.59■■□□□ 1.53
COL27A1Q8IZC6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.58■■□□□ 1.53
COL27A1Q8IZC6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.58■■□□□ 1.53
COL27A1Q8IZC6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
COL27A1Q8IZC6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.58■■□□□ 1.53
COL27A1Q8IZC6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL27A1Q8IZC6 AC110285.7-201ENST00000624417 1536 ntBASIC24.58■■□□□ 1.52
COL27A1Q8IZC6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
COL27A1Q8IZC6 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.58■■□□□ 1.52
COL27A1Q8IZC6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.56■■□□□ 1.52
COL27A1Q8IZC6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL27A1Q8IZC6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.56■■□□□ 1.52
COL27A1Q8IZC6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL27A1Q8IZC6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.55■■□□□ 1.52
COL27A1Q8IZC6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
COL27A1Q8IZC6 MIR219A2-201ENST00000608502 1504 ntBASIC24.55■■□□□ 1.52
COL27A1Q8IZC6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.55■■□□□ 1.52
COL27A1Q8IZC6 U85056.1-201ENST00000616429 682 ntBASIC24.55■■□□□ 1.52
COL27A1Q8IZC6 AC018358.1-201ENST00000631079 1402 ntBASIC24.54■■□□□ 1.52
COL27A1Q8IZC6 KRT18P60-201ENST00000312876 1297 ntBASIC24.54■■□□□ 1.52
COL27A1Q8IZC6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.54■■□□□ 1.52
COL27A1Q8IZC6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL27A1Q8IZC6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL27A1Q8IZC6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.53■■□□□ 1.52
COL27A1Q8IZC6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
COL27A1Q8IZC6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms