Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC65Q8IXS2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC65Q8IXS2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC65Q8IXS2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.49■■■□□ 2.15
CCDC65Q8IXS2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC65Q8IXS2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
CCDC65Q8IXS2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC65Q8IXS2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC65Q8IXS2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC65Q8IXS2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC65Q8IXS2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC65Q8IXS2 AC142086.6-201ENST00000621154 1765 ntBASIC28.47■■■□□ 2.15
CCDC65Q8IXS2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CCDC65Q8IXS2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.46■■■□□ 2.15
CCDC65Q8IXS2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CCDC65Q8IXS2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
CCDC65Q8IXS2 AC100797.4-201ENST00000631653 1827 ntBASIC28.46■■■□□ 2.15
CCDC65Q8IXS2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CCDC65Q8IXS2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CCDC65Q8IXS2 WHAMMP2-203ENST00000563942 1603 ntBASIC28.45■■■□□ 2.14
CCDC65Q8IXS2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CCDC65Q8IXS2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
CCDC65Q8IXS2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 DUX4L29-201ENST00000425409 679 ntBASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 AC021231.2-201ENST00000594613 730 ntBASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CCDC65Q8IXS2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC65Q8IXS2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.42■■■□□ 2.14
CCDC65Q8IXS2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC65Q8IXS2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC65Q8IXS2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC65Q8IXS2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC65Q8IXS2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.41■■■□□ 2.14
CCDC65Q8IXS2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC65Q8IXS2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.39■■■□□ 2.14
CCDC65Q8IXS2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CCDC65Q8IXS2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC65Q8IXS2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.37■■■□□ 2.13
CCDC65Q8IXS2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.37■■■□□ 2.13
CCDC65Q8IXS2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC65Q8IXS2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC65Q8IXS2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.36■■■□□ 2.13
CCDC65Q8IXS2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC65Q8IXS2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC65Q8IXS2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
CCDC65Q8IXS2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.35■■■□□ 2.13
CCDC65Q8IXS2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CCDC65Q8IXS2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.34■■■□□ 2.13
CCDC65Q8IXS2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.34■■■□□ 2.13
CCDC65Q8IXS2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC65Q8IXS2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC65Q8IXS2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC65Q8IXS2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.32■■■□□ 2.12
CCDC65Q8IXS2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.32■■■□□ 2.12
CCDC65Q8IXS2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.32■■■□□ 2.12
CCDC65Q8IXS2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC65Q8IXS2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC65Q8IXS2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC65Q8IXS2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.3■■■□□ 2.12
CCDC65Q8IXS2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.3■■■□□ 2.12
CCDC65Q8IXS2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.3■■■□□ 2.12
CCDC65Q8IXS2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CCDC65Q8IXS2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC65Q8IXS2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC65Q8IXS2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC65Q8IXS2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.27■■■□□ 2.12
CCDC65Q8IXS2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.27■■■□□ 2.12
CCDC65Q8IXS2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC65Q8IXS2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC65Q8IXS2 AP002414.2-202ENST00000590929 1450 ntBASIC28.27■■■□□ 2.12
CCDC65Q8IXS2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
CCDC65Q8IXS2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CCDC65Q8IXS2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC65Q8IXS2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC65Q8IXS2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CCDC65Q8IXS2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
CCDC65Q8IXS2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC65Q8IXS2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC65Q8IXS2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms