Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR7108-201ENST00000614319 87 ntBASIC27.1■■□□□ 1.93
SCUBE3Q8IX30 WHAMMP2-203ENST00000563942 1603 ntBASIC27.09■■□□□ 1.93
SCUBE3Q8IX30 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SCUBE3Q8IX30 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.08■■□□□ 1.93
SCUBE3Q8IX30 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SCUBE3Q8IX30 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.08■■□□□ 1.93
SCUBE3Q8IX30 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SCUBE3Q8IX30 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.06■■□□□ 1.92
SCUBE3Q8IX30 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
SCUBE3Q8IX30 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.05■■□□□ 1.92
SCUBE3Q8IX30 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCUBE3Q8IX30 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 AC100797.4-201ENST00000631653 1827 ntBASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.02■■□□□ 1.92
SCUBE3Q8IX30 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCUBE3Q8IX30 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SCUBE3Q8IX30 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27■■□□□ 1.91
SCUBE3Q8IX30 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SCUBE3Q8IX30 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCUBE3Q8IX30 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
SCUBE3Q8IX30 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.98■■□□□ 1.91
SCUBE3Q8IX30 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.98■■□□□ 1.91
SCUBE3Q8IX30 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SCUBE3Q8IX30 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SCUBE3Q8IX30 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.97■■□□□ 1.91
SCUBE3Q8IX30 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCUBE3Q8IX30 LINC01971-201ENST00000617888 1048 ntBASIC26.97■■□□□ 1.91
SCUBE3Q8IX30 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SCUBE3Q8IX30 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.96■■□□□ 1.91
SCUBE3Q8IX30 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.95■■□□□ 1.91
SCUBE3Q8IX30 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
SCUBE3Q8IX30 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SCUBE3Q8IX30 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SCUBE3Q8IX30 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.94■■□□□ 1.9
SCUBE3Q8IX30 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.93■■□□□ 1.9
SCUBE3Q8IX30 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCUBE3Q8IX30 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCUBE3Q8IX30 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SCUBE3Q8IX30 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SCUBE3Q8IX30 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SCUBE3Q8IX30 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
SCUBE3Q8IX30 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 DUX4L11-201ENST00000611504 1267 ntBASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 DUX4L12-201ENST00000614593 1267 ntBASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 DUX4L14-201ENST00000621227 1267 ntBASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCUBE3Q8IX30 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.9■■□□□ 1.9
SCUBE3Q8IX30 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.9■■□□□ 1.9
SCUBE3Q8IX30 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCUBE3Q8IX30 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCUBE3Q8IX30 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCUBE3Q8IX30 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.89■■□□□ 1.9
SCUBE3Q8IX30 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCUBE3Q8IX30 HLA-V-202ENST00000446817 847 ntBASIC26.88■■□□□ 1.89
SCUBE3Q8IX30 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.88■■□□□ 1.89
SCUBE3Q8IX30 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCUBE3Q8IX30 DRD5P2-201ENST00000421395 2012 ntBASIC26.87■■□□□ 1.89
SCUBE3Q8IX30 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCUBE3Q8IX30 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCUBE3Q8IX30 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SCUBE3Q8IX30 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCUBE3Q8IX30 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.86■■□□□ 1.89
SCUBE3Q8IX30 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.85■■□□□ 1.89
SCUBE3Q8IX30 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
SCUBE3Q8IX30 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
SCUBE3Q8IX30 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCUBE3Q8IX30 DUX4L13-201ENST00000554103 1267 ntBASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms