Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.26■■□□□ 1.95
RNF135Q8IUD6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.25■■□□□ 1.95
RNF135Q8IUD6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.25■■□□□ 1.95
RNF135Q8IUD6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.25■■□□□ 1.95
RNF135Q8IUD6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.24■■□□□ 1.95
RNF135Q8IUD6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF135Q8IUD6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF135Q8IUD6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF135Q8IUD6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RNF135Q8IUD6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.23■■□□□ 1.95
RNF135Q8IUD6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
RNF135Q8IUD6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF135Q8IUD6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF135Q8IUD6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF135Q8IUD6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF135Q8IUD6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.21■■□□□ 1.95
RNF135Q8IUD6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF135Q8IUD6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.2■■□□□ 1.94
RNF135Q8IUD6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF135Q8IUD6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF135Q8IUD6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RNF135Q8IUD6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF135Q8IUD6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
RNF135Q8IUD6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.17■■□□□ 1.94
RNF135Q8IUD6 U85056.1-201ENST00000616429 682 ntBASIC27.17■■□□□ 1.94
RNF135Q8IUD6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF135Q8IUD6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RNF135Q8IUD6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF135Q8IUD6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF135Q8IUD6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RNF135Q8IUD6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RNF135Q8IUD6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF135Q8IUD6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.13■■□□□ 1.93
RNF135Q8IUD6 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.13■■□□□ 1.93
RNF135Q8IUD6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
RNF135Q8IUD6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RNF135Q8IUD6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.12■■□□□ 1.93
RNF135Q8IUD6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.12■■□□□ 1.93
RNF135Q8IUD6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.12■■□□□ 1.93
RNF135Q8IUD6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.12■■□□□ 1.93
RNF135Q8IUD6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RNF135Q8IUD6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.11■■□□□ 1.93
RNF135Q8IUD6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RNF135Q8IUD6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.1■■□□□ 1.93
RNF135Q8IUD6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF135Q8IUD6 TSPY13P-201ENST00000338964 914 ntBASIC27.09■■□□□ 1.93
RNF135Q8IUD6 RARRES2P1-201ENST00000474487 481 ntBASIC27.09■■□□□ 1.93
RNF135Q8IUD6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF135Q8IUD6 LINC00273-201ENST00000539813 1452 ntBASIC27.08■■□□□ 1.93
RNF135Q8IUD6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
RNF135Q8IUD6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RNF135Q8IUD6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RNF135Q8IUD6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RNF135Q8IUD6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.06■■□□□ 1.92
RNF135Q8IUD6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RNF135Q8IUD6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF135Q8IUD6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF135Q8IUD6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
RNF135Q8IUD6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 AC004987.1-201ENST00000428627 508 ntBASIC27.04■■□□□ 1.92
RNF135Q8IUD6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.04■■□□□ 1.92
RNF135Q8IUD6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RNF135Q8IUD6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RNF135Q8IUD6 ATP5G2P3-201ENST00000429083 425 ntBASIC27.01■■□□□ 1.91
RNF135Q8IUD6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
RNF135Q8IUD6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF135Q8IUD6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
RNF135Q8IUD6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27■■□□□ 1.91
RNF135Q8IUD6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27■■□□□ 1.91
RNF135Q8IUD6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27■■□□□ 1.91
RNF135Q8IUD6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27■■□□□ 1.91
RNF135Q8IUD6 KRT18P60-201ENST00000312876 1297 ntBASIC26.99■■□□□ 1.91
RNF135Q8IUD6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF135Q8IUD6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.98■■□□□ 1.91
RNF135Q8IUD6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.98■■□□□ 1.91
RNF135Q8IUD6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.98■■□□□ 1.91
RNF135Q8IUD6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.98■■□□□ 1.91
RNF135Q8IUD6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
RNF135Q8IUD6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF135Q8IUD6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
RNF135Q8IUD6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RNF135Q8IUD6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.97■■□□□ 1.91
RNF135Q8IUD6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
RNF135Q8IUD6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RNF135Q8IUD6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF135Q8IUD6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms