Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smco1Q8CEZ1 Gm25262-201ENSMUST00000174934 133 ntBASIC21.43■■□□□ 1.02
Smco1Q8CEZ1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smco1Q8CEZ1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smco1Q8CEZ1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smco1Q8CEZ1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smco1Q8CEZ1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smco1Q8CEZ1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smco1Q8CEZ1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smco1Q8CEZ1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Smco1Q8CEZ1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Smco1Q8CEZ1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.39■■□□□ 1.01
Smco1Q8CEZ1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Smco1Q8CEZ1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smco1Q8CEZ1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smco1Q8CEZ1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smco1Q8CEZ1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smco1Q8CEZ1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Smco1Q8CEZ1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Smco1Q8CEZ1 Peli2-204ENSMUST00000226513 1320 ntBASIC21.37■■□□□ 1.01
Smco1Q8CEZ1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smco1Q8CEZ1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Smco1Q8CEZ1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smco1Q8CEZ1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Smco1Q8CEZ1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smco1Q8CEZ1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smco1Q8CEZ1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smco1Q8CEZ1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smco1Q8CEZ1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Smco1Q8CEZ1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Smco1Q8CEZ1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smco1Q8CEZ1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Smco1Q8CEZ1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smco1Q8CEZ1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smco1Q8CEZ1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Smco1Q8CEZ1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smco1Q8CEZ1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Smco1Q8CEZ1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smco1Q8CEZ1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smco1Q8CEZ1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smco1Q8CEZ1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smco1Q8CEZ1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smco1Q8CEZ1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smco1Q8CEZ1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smco1Q8CEZ1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smco1Q8CEZ1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smco1Q8CEZ1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.27■■□□□ 1
Smco1Q8CEZ1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smco1Q8CEZ1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco1Q8CEZ1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smco1Q8CEZ1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smco1Q8CEZ1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smco1Q8CEZ1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smco1Q8CEZ1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smco1Q8CEZ1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.23■□□□□ 0.99
Smco1Q8CEZ1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms