Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Cfap54Q8C6S9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap54Q8C6S9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.34■■□□□ 1.33
Cfap54Q8C6S9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap54Q8C6S9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Cfap54Q8C6S9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.32■■□□□ 1.32
Cfap54Q8C6S9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cfap54Q8C6S9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap54Q8C6S9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap54Q8C6S9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap54Q8C6S9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap54Q8C6S9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap54Q8C6S9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap54Q8C6S9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Cfap54Q8C6S9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.29■■□□□ 1.32
Cfap54Q8C6S9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap54Q8C6S9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap54Q8C6S9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Gm45364-201ENSMUST00000210883 159 ntBASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap54Q8C6S9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap54Q8C6S9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap54Q8C6S9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap54Q8C6S9 Gm7332-201ENSMUST00000118351 454 ntBASIC23.24■■□□□ 1.31
Cfap54Q8C6S9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Cfap54Q8C6S9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.22■■□□□ 1.31
Cfap54Q8C6S9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.22■■□□□ 1.31
Cfap54Q8C6S9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cfap54Q8C6S9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap54Q8C6S9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap54Q8C6S9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Cfap54Q8C6S9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap54Q8C6S9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap54Q8C6S9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap54Q8C6S9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap54Q8C6S9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap54Q8C6S9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Cfap54Q8C6S9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cfap54Q8C6S9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cfap54Q8C6S9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cfap54Q8C6S9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap54Q8C6S9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.16■■□□□ 1.3
Cfap54Q8C6S9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap54Q8C6S9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap54Q8C6S9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.16■■□□□ 1.3
Cfap54Q8C6S9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap54Q8C6S9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.14■■□□□ 1.3
Cfap54Q8C6S9 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.14■■□□□ 1.3
Cfap54Q8C6S9 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.14■■□□□ 1.3
Cfap54Q8C6S9 Gm14523-201ENSMUST00000117260 558 ntBASIC23.14■■□□□ 1.29
Cfap54Q8C6S9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap54Q8C6S9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap54Q8C6S9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Cfap54Q8C6S9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap54Q8C6S9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.1■■□□□ 1.29
Cfap54Q8C6S9 Gm27502-201ENSMUST00000183495 199 ntBASIC23.1■■□□□ 1.29
Cfap54Q8C6S9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap54Q8C6S9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap54Q8C6S9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap54Q8C6S9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap54Q8C6S9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap54Q8C6S9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cfap54Q8C6S9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.08■■□□□ 1.29
Cfap54Q8C6S9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.08■■□□□ 1.29
Cfap54Q8C6S9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Cfap54Q8C6S9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cfap54Q8C6S9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Cfap54Q8C6S9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap54Q8C6S9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap54Q8C6S9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap54Q8C6S9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap54Q8C6S9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cfap54Q8C6S9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.04■■□□□ 1.28
Cfap54Q8C6S9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Cfap54Q8C6S9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.04■■□□□ 1.28
Cfap54Q8C6S9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap54Q8C6S9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap54Q8C6S9 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.02■■□□□ 1.28
Cfap54Q8C6S9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.02■■□□□ 1.28
Cfap54Q8C6S9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap54Q8C6S9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap54Q8C6S9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap54Q8C6S9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap54Q8C6S9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap54Q8C6S9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap54Q8C6S9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms