Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Cwc22Q8C5N3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
Cwc22Q8C5N3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Cwc22Q8C5N3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
Cwc22Q8C5N3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
Cwc22Q8C5N3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Cwc22Q8C5N3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Cwc22Q8C5N3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cwc22Q8C5N3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cwc22Q8C5N3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cwc22Q8C5N3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cwc22Q8C5N3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cwc22Q8C5N3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cwc22Q8C5N3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.82■■■□□ 2.85
Cwc22Q8C5N3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Cwc22Q8C5N3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cwc22Q8C5N3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cwc22Q8C5N3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cwc22Q8C5N3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cwc22Q8C5N3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
Cwc22Q8C5N3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Cwc22Q8C5N3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Cwc22Q8C5N3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Cwc22Q8C5N3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cwc22Q8C5N3 Particl-201ENSMUST00000205370 1560 ntBASIC32.76■■■□□ 2.84
Cwc22Q8C5N3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Cwc22Q8C5N3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Cwc22Q8C5N3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
Cwc22Q8C5N3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
Cwc22Q8C5N3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Cwc22Q8C5N3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC32.73■■■□□ 2.83
Cwc22Q8C5N3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cwc22Q8C5N3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.72■■■□□ 2.83
Cwc22Q8C5N3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.72■■■□□ 2.83
Cwc22Q8C5N3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Cwc22Q8C5N3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Cwc22Q8C5N3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.7■■■□□ 2.83
Cwc22Q8C5N3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Cwc22Q8C5N3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Cwc22Q8C5N3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Cwc22Q8C5N3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cwc22Q8C5N3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
Cwc22Q8C5N3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
Cwc22Q8C5N3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Cwc22Q8C5N3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cwc22Q8C5N3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Cwc22Q8C5N3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
Cwc22Q8C5N3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cwc22Q8C5N3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cwc22Q8C5N3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Cwc22Q8C5N3 Gm7432-201ENSMUST00000210343 879 ntBASIC32.66■■■□□ 2.82
Cwc22Q8C5N3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Cwc22Q8C5N3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cwc22Q8C5N3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.64■■■□□ 2.82
Cwc22Q8C5N3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Cwc22Q8C5N3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.63■■■□□ 2.81
Cwc22Q8C5N3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cwc22Q8C5N3 Gm37136-201ENSMUST00000194368 194 ntBASIC32.61■■■□□ 2.81
Cwc22Q8C5N3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cwc22Q8C5N3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cwc22Q8C5N3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cwc22Q8C5N3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cwc22Q8C5N3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Cwc22Q8C5N3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Cwc22Q8C5N3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.56■■■□□ 2.8
Cwc22Q8C5N3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cwc22Q8C5N3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Cwc22Q8C5N3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cwc22Q8C5N3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Cwc22Q8C5N3 Gm14121-201ENSMUST00000121441 1380 ntBASIC32.54■■■□□ 2.8
Cwc22Q8C5N3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cwc22Q8C5N3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Cwc22Q8C5N3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
Cwc22Q8C5N3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Cwc22Q8C5N3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Cwc22Q8C5N3 Gm11599-201ENSMUST00000118720 878 ntBASIC32.49■■■□□ 2.79
Cwc22Q8C5N3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Cwc22Q8C5N3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Cwc22Q8C5N3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC32.48■■■□□ 2.79
Cwc22Q8C5N3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Cwc22Q8C5N3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cwc22Q8C5N3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
Cwc22Q8C5N3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC32.46■■■□□ 2.79
Cwc22Q8C5N3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cwc22Q8C5N3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
Cwc22Q8C5N3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cwc22Q8C5N3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Cwc22Q8C5N3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Cwc22Q8C5N3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.42■■■□□ 2.78
Cwc22Q8C5N3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cwc22Q8C5N3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Cwc22Q8C5N3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Cwc22Q8C5N3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Cwc22Q8C5N3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC32.4■■■□□ 2.78
Cwc22Q8C5N3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.39■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms