Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc60Q8C4J0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Ccdc60Q8C4J0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.26■■■□□ 2.43
Ccdc60Q8C4J0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc60Q8C4J0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc60Q8C4J0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc60Q8C4J0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc60Q8C4J0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc60Q8C4J0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc60Q8C4J0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc60Q8C4J0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc60Q8C4J0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc60Q8C4J0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc60Q8C4J0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ccdc60Q8C4J0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ccdc60Q8C4J0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.19■■■□□ 2.42
Ccdc60Q8C4J0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Ccdc60Q8C4J0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc60Q8C4J0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc60Q8C4J0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ccdc60Q8C4J0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc60Q8C4J0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Ccdc60Q8C4J0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc60Q8C4J0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ccdc60Q8C4J0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc60Q8C4J0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc60Q8C4J0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc60Q8C4J0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc60Q8C4J0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc60Q8C4J0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Ccdc60Q8C4J0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc60Q8C4J0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Ccdc60Q8C4J0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc60Q8C4J0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc60Q8C4J0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.1■■■□□ 2.41
Ccdc60Q8C4J0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc60Q8C4J0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc60Q8C4J0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc60Q8C4J0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc60Q8C4J0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc60Q8C4J0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
Ccdc60Q8C4J0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc60Q8C4J0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.05■■■□□ 2.4
Ccdc60Q8C4J0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc60Q8C4J0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc60Q8C4J0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc60Q8C4J0 Particl-201ENSMUST00000205370 1560 ntBASIC30.03■■■□□ 2.4
Ccdc60Q8C4J0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Ccdc60Q8C4J0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc60Q8C4J0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Ccdc60Q8C4J0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ccdc60Q8C4J0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc60Q8C4J0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc60Q8C4J0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Ccdc60Q8C4J0 Gm37847-201ENSMUST00000192163 1497 ntBASIC29.99■■■□□ 2.39
Ccdc60Q8C4J0 Gm31748-201ENSMUST00000194938 1497 ntBASIC29.99■■■□□ 2.39
Ccdc60Q8C4J0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.99■■■□□ 2.39
Ccdc60Q8C4J0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
Ccdc60Q8C4J0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.98■■■□□ 2.39
Ccdc60Q8C4J0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.98■■■□□ 2.39
Ccdc60Q8C4J0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc60Q8C4J0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc60Q8C4J0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc60Q8C4J0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccdc60Q8C4J0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
Ccdc60Q8C4J0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc60Q8C4J0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ccdc60Q8C4J0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
Ccdc60Q8C4J0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ccdc60Q8C4J0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ccdc60Q8C4J0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ccdc60Q8C4J0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ccdc60Q8C4J0 Gm7432-201ENSMUST00000210343 879 ntBASIC29.93■■■□□ 2.38
Ccdc60Q8C4J0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ccdc60Q8C4J0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Ccdc60Q8C4J0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.92■■■□□ 2.38
Ccdc60Q8C4J0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Ccdc60Q8C4J0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.91■■■□□ 2.38
Ccdc60Q8C4J0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ccdc60Q8C4J0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ccdc60Q8C4J0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ccdc60Q8C4J0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.89■■■□□ 2.38
Ccdc60Q8C4J0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ccdc60Q8C4J0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ccdc60Q8C4J0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.87■■■□□ 2.37
Ccdc60Q8C4J0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ccdc60Q8C4J0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Ccdc60Q8C4J0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC29.87■■■□□ 2.37
Ccdc60Q8C4J0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ccdc60Q8C4J0 Gm37136-201ENSMUST00000194368 194 ntBASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms