Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smco3Q8BQM7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smco3Q8BQM7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smco3Q8BQM7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco3Q8BQM7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco3Q8BQM7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco3Q8BQM7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smco3Q8BQM7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco3Q8BQM7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smco3Q8BQM7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco3Q8BQM7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smco3Q8BQM7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smco3Q8BQM7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smco3Q8BQM7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smco3Q8BQM7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smco3Q8BQM7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smco3Q8BQM7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smco3Q8BQM7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smco3Q8BQM7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smco3Q8BQM7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smco3Q8BQM7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smco3Q8BQM7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco3Q8BQM7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco3Q8BQM7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco3Q8BQM7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smco3Q8BQM7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smco3Q8BQM7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.16■□□□□ 0.66
Smco3Q8BQM7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smco3Q8BQM7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smco3Q8BQM7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smco3Q8BQM7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smco3Q8BQM7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smco3Q8BQM7 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.15■□□□□ 0.66
Smco3Q8BQM7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smco3Q8BQM7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smco3Q8BQM7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smco3Q8BQM7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smco3Q8BQM7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.13■□□□□ 0.65
Smco3Q8BQM7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.13■□□□□ 0.65
Smco3Q8BQM7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smco3Q8BQM7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smco3Q8BQM7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smco3Q8BQM7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smco3Q8BQM7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smco3Q8BQM7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smco3Q8BQM7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smco3Q8BQM7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smco3Q8BQM7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smco3Q8BQM7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smco3Q8BQM7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smco3Q8BQM7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smco3Q8BQM7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smco3Q8BQM7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smco3Q8BQM7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smco3Q8BQM7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smco3Q8BQM7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smco3Q8BQM7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Smco3Q8BQM7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smco3Q8BQM7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smco3Q8BQM7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smco3Q8BQM7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smco3Q8BQM7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.06■□□□□ 0.64
Smco3Q8BQM7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smco3Q8BQM7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smco3Q8BQM7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smco3Q8BQM7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smco3Q8BQM7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smco3Q8BQM7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smco3Q8BQM7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smco3Q8BQM7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.02■□□□□ 0.64
Smco3Q8BQM7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms