Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn3Q8BHH8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Clrn3Q8BHH8 Nkain2-201ENSMUST00000092602 558 ntBASIC21.95■■□□□ 1.1
Clrn3Q8BHH8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Clrn3Q8BHH8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Clrn3Q8BHH8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Clrn3Q8BHH8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clrn3Q8BHH8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Gm30023-201ENSMUST00000197970 889 ntBASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn3Q8BHH8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Clrn3Q8BHH8 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.89■■□□□ 1.09
Clrn3Q8BHH8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clrn3Q8BHH8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clrn3Q8BHH8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Clrn3Q8BHH8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.87■■□□□ 1.09
Clrn3Q8BHH8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.87■■□□□ 1.09
Clrn3Q8BHH8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Clrn3Q8BHH8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clrn3Q8BHH8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Clrn3Q8BHH8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clrn3Q8BHH8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clrn3Q8BHH8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.85■■□□□ 1.09
Clrn3Q8BHH8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clrn3Q8BHH8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clrn3Q8BHH8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn3Q8BHH8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn3Q8BHH8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn3Q8BHH8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clrn3Q8BHH8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clrn3Q8BHH8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Clrn3Q8BHH8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn3Q8BHH8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Clrn3Q8BHH8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.81■■□□□ 1.08
Clrn3Q8BHH8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Clrn3Q8BHH8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Clrn3Q8BHH8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clrn3Q8BHH8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Clrn3Q8BHH8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clrn3Q8BHH8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clrn3Q8BHH8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clrn3Q8BHH8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Clrn3Q8BHH8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.78■■□□□ 1.08
Clrn3Q8BHH8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clrn3Q8BHH8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clrn3Q8BHH8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.77■■□□□ 1.08
Clrn3Q8BHH8 Gm8503-201ENSMUST00000118131 455 ntBASIC21.77■■□□□ 1.08
Clrn3Q8BHH8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clrn3Q8BHH8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Clrn3Q8BHH8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Clrn3Q8BHH8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.75■■□□□ 1.07
Clrn3Q8BHH8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clrn3Q8BHH8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clrn3Q8BHH8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clrn3Q8BHH8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clrn3Q8BHH8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Clrn3Q8BHH8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clrn3Q8BHH8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clrn3Q8BHH8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clrn3Q8BHH8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.73■■□□□ 1.07
Clrn3Q8BHH8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn3Q8BHH8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn3Q8BHH8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.72■■□□□ 1.07
Clrn3Q8BHH8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clrn3Q8BHH8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clrn3Q8BHH8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Clrn3Q8BHH8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Clrn3Q8BHH8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.7■■□□□ 1.06
Clrn3Q8BHH8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clrn3Q8BHH8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn3Q8BHH8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.69■■□□□ 1.06
Clrn3Q8BHH8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn3Q8BHH8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms