Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Npas4Q8BGD7 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.43■■□□□ 1.66
Npas4Q8BGD7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.43■■□□□ 1.66
Npas4Q8BGD7 Gm4799-201ENSMUST00000095396 657 ntBASIC25.43■■□□□ 1.66
Npas4Q8BGD7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Npas4Q8BGD7 Gm11687-201ENSMUST00000118911 886 ntBASIC25.42■■□□□ 1.66
Npas4Q8BGD7 Gm9806-201ENSMUST00000051080 552 ntBASIC25.42■■□□□ 1.66
Npas4Q8BGD7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Npas4Q8BGD7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.41■■□□□ 1.66
Npas4Q8BGD7 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.41■■□□□ 1.66
Npas4Q8BGD7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Npas4Q8BGD7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Npas4Q8BGD7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Npas4Q8BGD7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Npas4Q8BGD7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Npas4Q8BGD7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Npas4Q8BGD7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Npas4Q8BGD7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Npas4Q8BGD7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.38■■□□□ 1.65
Npas4Q8BGD7 Mir3960-201ENSMUST00000198213 73 ntBASIC25.38■■□□□ 1.65
Npas4Q8BGD7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Npas4Q8BGD7 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.37■■□□□ 1.65
Npas4Q8BGD7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Npas4Q8BGD7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Npas4Q8BGD7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.36■■□□□ 1.65
Npas4Q8BGD7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.36■■□□□ 1.65
Npas4Q8BGD7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Npas4Q8BGD7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Npas4Q8BGD7 Gm37136-201ENSMUST00000194368 194 ntBASIC25.34■■□□□ 1.65
Npas4Q8BGD7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Npas4Q8BGD7 Gm16437-201ENSMUST00000025669 507 ntBASIC25.33■■□□□ 1.65
Npas4Q8BGD7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Npas4Q8BGD7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.32■■□□□ 1.64
Npas4Q8BGD7 Gm45364-201ENSMUST00000210883 159 ntBASIC25.31■■□□□ 1.64
Npas4Q8BGD7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Npas4Q8BGD7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.31■■□□□ 1.64
Npas4Q8BGD7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Npas4Q8BGD7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Gm12366-201ENSMUST00000121722 873 ntBASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Gm5786-201ENSMUST00000085368 882 ntBASIC25.3■■□□□ 1.64
Npas4Q8BGD7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Npas4Q8BGD7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Npas4Q8BGD7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Npas4Q8BGD7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.28■■□□□ 1.64
Npas4Q8BGD7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.28■■□□□ 1.64
Npas4Q8BGD7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Npas4Q8BGD7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Npas4Q8BGD7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Npas4Q8BGD7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.26■■□□□ 1.63
Npas4Q8BGD7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Npas4Q8BGD7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Npas4Q8BGD7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Npas4Q8BGD7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Npas4Q8BGD7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Npas4Q8BGD7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Npas4Q8BGD7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Npas4Q8BGD7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.24■■□□□ 1.63
Npas4Q8BGD7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Npas4Q8BGD7 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.23■■□□□ 1.63
Npas4Q8BGD7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Npas4Q8BGD7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Npas4Q8BGD7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Npas4Q8BGD7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Npas4Q8BGD7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Npas4Q8BGD7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Npas4Q8BGD7 Zxda-201ENSMUST00000117281 2621 ntBASIC25.21■■□□□ 1.63
Npas4Q8BGD7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Npas4Q8BGD7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.2■■□□□ 1.62
Npas4Q8BGD7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Npas4Q8BGD7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Npas4Q8BGD7 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.17■■□□□ 1.62
Npas4Q8BGD7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.17■■□□□ 1.62
Npas4Q8BGD7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.17■■□□□ 1.62
Npas4Q8BGD7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Npas4Q8BGD7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Npas4Q8BGD7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.14■■□□□ 1.62
Npas4Q8BGD7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Npas4Q8BGD7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
Npas4Q8BGD7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Npas4Q8BGD7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Npas4Q8BGD7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Npas4Q8BGD7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.12■■□□□ 1.61
Npas4Q8BGD7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.12■■□□□ 1.61
Npas4Q8BGD7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Npas4Q8BGD7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Npas4Q8BGD7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Npas4Q8BGD7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Npas4Q8BGD7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.1■■□□□ 1.61
Npas4Q8BGD7 Gm27502-201ENSMUST00000183495 199 ntBASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms