Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAB11FIP4Q86YS3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAB11FIP4Q86YS3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAB11FIP4Q86YS3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAB11FIP4Q86YS3 AC135983.2-203ENST00000454486 1613 ntBASIC30.14■■■□□ 2.41
RAB11FIP4Q86YS3 LINC00273-201ENST00000539813 1452 ntBASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAB11FIP4Q86YS3 AC100797.4-201ENST00000631653 1827 ntBASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.12■■■□□ 2.41
RAB11FIP4Q86YS3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RAB11FIP4Q86YS3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RAB11FIP4Q86YS3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RAB11FIP4Q86YS3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAB11FIP4Q86YS3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
RAB11FIP4Q86YS3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
RAB11FIP4Q86YS3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RAB11FIP4Q86YS3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RAB11FIP4Q86YS3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
RAB11FIP4Q86YS3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RAB11FIP4Q86YS3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
RAB11FIP4Q86YS3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAB11FIP4Q86YS3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.05■■■□□ 2.4
RAB11FIP4Q86YS3 DRD5P2-201ENST00000421395 2012 ntBASIC30.05■■■□□ 2.4
RAB11FIP4Q86YS3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.05■■■□□ 2.4
RAB11FIP4Q86YS3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 ABHD17AP4-201ENST00000411545 909 ntBASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
RAB11FIP4Q86YS3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 AP004833.2-201ENST00000532228 1454 ntBASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.03■■■□□ 2.4
RAB11FIP4Q86YS3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RAB11FIP4Q86YS3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RAB11FIP4Q86YS3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RAB11FIP4Q86YS3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAB11FIP4Q86YS3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAB11FIP4Q86YS3 ZNRF2P2-203ENST00000454624 420 ntBASIC30.01■■■□□ 2.39
RAB11FIP4Q86YS3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAB11FIP4Q86YS3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAB11FIP4Q86YS3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAB11FIP4Q86YS3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30■■■□□ 2.39
RAB11FIP4Q86YS3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAB11FIP4Q86YS3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAB11FIP4Q86YS3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAB11FIP4Q86YS3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAB11FIP4Q86YS3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.98■■■□□ 2.39
RAB11FIP4Q86YS3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
RAB11FIP4Q86YS3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
RAB11FIP4Q86YS3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.98■■■□□ 2.39
RAB11FIP4Q86YS3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
RAB11FIP4Q86YS3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.97■■■□□ 2.39
RAB11FIP4Q86YS3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.97■■■□□ 2.39
RAB11FIP4Q86YS3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RAB11FIP4Q86YS3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RAB11FIP4Q86YS3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.96■■■□□ 2.39
RAB11FIP4Q86YS3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.95■■■□□ 2.39
RAB11FIP4Q86YS3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
RAB11FIP4Q86YS3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAB11FIP4Q86YS3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAB11FIP4Q86YS3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAB11FIP4Q86YS3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAB11FIP4Q86YS3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.9■■■□□ 2.38
RAB11FIP4Q86YS3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.9■■■□□ 2.38
RAB11FIP4Q86YS3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.89■■■□□ 2.38
RAB11FIP4Q86YS3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.89■■■□□ 2.38
RAB11FIP4Q86YS3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
RAB11FIP4Q86YS3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.88■■■□□ 2.37
RAB11FIP4Q86YS3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAB11FIP4Q86YS3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.88■■■□□ 2.37
RAB11FIP4Q86YS3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAB11FIP4Q86YS3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
RAB11FIP4Q86YS3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAB11FIP4Q86YS3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAB11FIP4Q86YS3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.87■■■□□ 2.37
RAB11FIP4Q86YS3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAB11FIP4Q86YS3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAB11FIP4Q86YS3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.86■■■□□ 2.37
RAB11FIP4Q86YS3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAB11FIP4Q86YS3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RAB11FIP4Q86YS3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAB11FIP4Q86YS3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAB11FIP4Q86YS3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RAB11FIP4Q86YS3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAB11FIP4Q86YS3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAB11FIP4Q86YS3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.84■■■□□ 2.37
RAB11FIP4Q86YS3 LINC01971-201ENST00000617888 1048 ntBASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms