Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
VPS36Q86VN1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
VPS36Q86VN1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
VPS36Q86VN1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
VPS36Q86VN1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
VPS36Q86VN1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.5■■□□□ 1.99
VPS36Q86VN1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VPS36Q86VN1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
VPS36Q86VN1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VPS36Q86VN1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VPS36Q86VN1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
VPS36Q86VN1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
VPS36Q86VN1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.46■■□□□ 1.99
VPS36Q86VN1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.46■■□□□ 1.99
VPS36Q86VN1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
VPS36Q86VN1 BX255925.1-201ENST00000566954 1854 ntBASIC27.46■■□□□ 1.99
VPS36Q86VN1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
VPS36Q86VN1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
VPS36Q86VN1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
VPS36Q86VN1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
VPS36Q86VN1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.44■■□□□ 1.98
VPS36Q86VN1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS36Q86VN1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS36Q86VN1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS36Q86VN1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS36Q86VN1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS36Q86VN1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.43■■□□□ 1.98
VPS36Q86VN1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS36Q86VN1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
VPS36Q86VN1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS36Q86VN1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS36Q86VN1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS36Q86VN1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.42■■□□□ 1.98
VPS36Q86VN1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
VPS36Q86VN1 AC005559.1-201ENST00000589661 871 ntBASIC27.41■■□□□ 1.98
VPS36Q86VN1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.41■■□□□ 1.98
VPS36Q86VN1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
VPS36Q86VN1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
VPS36Q86VN1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
VPS36Q86VN1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
VPS36Q86VN1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
VPS36Q86VN1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
VPS36Q86VN1 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.39■■□□□ 1.97
VPS36Q86VN1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
VPS36Q86VN1 AC100797.4-201ENST00000631653 1827 ntBASIC27.38■■□□□ 1.97
VPS36Q86VN1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.38■■□□□ 1.97
VPS36Q86VN1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
VPS36Q86VN1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
VPS36Q86VN1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
VPS36Q86VN1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.37■■□□□ 1.97
VPS36Q86VN1 AL121749.1-202ENST00000609313 2153 ntBASIC27.37■■□□□ 1.97
VPS36Q86VN1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
VPS36Q86VN1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
VPS36Q86VN1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
VPS36Q86VN1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.36■■□□□ 1.97
VPS36Q86VN1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS36Q86VN1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
VPS36Q86VN1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
VPS36Q86VN1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS36Q86VN1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS36Q86VN1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS36Q86VN1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
VPS36Q86VN1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.34■■□□□ 1.97
VPS36Q86VN1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS36Q86VN1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VPS36Q86VN1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
VPS36Q86VN1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VPS36Q86VN1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
VPS36Q86VN1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.32■■□□□ 1.96
VPS36Q86VN1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.32■■□□□ 1.96
VPS36Q86VN1 LINC01003-201ENST00000564834 1764 ntBASIC27.32■■□□□ 1.96
VPS36Q86VN1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VPS36Q86VN1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.32■■□□□ 1.96
VPS36Q86VN1 AC108673.1-201ENST00000510422 1159 ntBASIC27.31■■□□□ 1.96
VPS36Q86VN1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VPS36Q86VN1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VPS36Q86VN1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VPS36Q86VN1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
VPS36Q86VN1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
VPS36Q86VN1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
VPS36Q86VN1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VPS36Q86VN1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VPS36Q86VN1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
VPS36Q86VN1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
VPS36Q86VN1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.28■■□□□ 1.96
VPS36Q86VN1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
VPS36Q86VN1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.27■■□□□ 1.96
VPS36Q86VN1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VPS36Q86VN1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.26■■□□□ 1.95
VPS36Q86VN1 AP002414.2-202ENST00000590929 1450 ntBASIC27.26■■□□□ 1.95
VPS36Q86VN1 RPS2P35-201ENST00000443417 897 ntBASIC27.26■■□□□ 1.95
VPS36Q86VN1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.26■■□□□ 1.95
VPS36Q86VN1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
VPS36Q86VN1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
VPS36Q86VN1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS36Q86VN1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS36Q86VN1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS36Q86VN1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS36Q86VN1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.24■■□□□ 1.95
VPS36Q86VN1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms