Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L13-201ENST00000554103 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L15-201ENST00000611059 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L23-201ENST00000615195 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L24-201ENST00000617576 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L22-201ENST00000618238 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L20-201ENST00000619712 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L21-201ENST00000622058 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L10-201ENST00000622460 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L25-201ENST00000624915 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MIR639-201ENST00000384974 98 ntBASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 AC139426.1-201ENST00000568218 2529 ntBASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LAPTM4BQ86VI4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
LAPTM4BQ86VI4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LAPTM4BQ86VI4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LAPTM4BQ86VI4 AC135983.2-203ENST00000454486 1613 ntBASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 MIR4449-201ENST00000578365 66 ntBASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LAPTM4BQ86VI4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LAPTM4BQ86VI4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LAPTM4BQ86VI4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
LAPTM4BQ86VI4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LAPTM4BQ86VI4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
LAPTM4BQ86VI4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
LAPTM4BQ86VI4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LAPTM4BQ86VI4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms