Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
RSPH3Q86UC2 GPX1-201ENST00000419349 1106 ntBASIC28.45■■■□□ 2.14
RSPH3Q86UC2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.44■■■□□ 2.14
RSPH3Q86UC2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
RSPH3Q86UC2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RSPH3Q86UC2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.44■■■□□ 2.14
RSPH3Q86UC2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.43■■■□□ 2.14
RSPH3Q86UC2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
RSPH3Q86UC2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
RSPH3Q86UC2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RSPH3Q86UC2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RSPH3Q86UC2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.42■■■□□ 2.14
RSPH3Q86UC2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.42■■■□□ 2.14
RSPH3Q86UC2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RSPH3Q86UC2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
RSPH3Q86UC2 RARRES2P2-201ENST00000394842 485 ntBASIC28.41■■■□□ 2.14
RSPH3Q86UC2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RSPH3Q86UC2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.41■■■□□ 2.14
RSPH3Q86UC2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RSPH3Q86UC2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
RSPH3Q86UC2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RSPH3Q86UC2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RSPH3Q86UC2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RSPH3Q86UC2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RSPH3Q86UC2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.39■■■□□ 2.14
RSPH3Q86UC2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RSPH3Q86UC2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.37■■■□□ 2.13
RSPH3Q86UC2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
RSPH3Q86UC2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
RSPH3Q86UC2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.37■■■□□ 2.13
RSPH3Q86UC2 RNF126P1-201ENST00000567452 1320 ntBASIC28.37■■■□□ 2.13
RSPH3Q86UC2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RSPH3Q86UC2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
RSPH3Q86UC2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RSPH3Q86UC2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RSPH3Q86UC2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RSPH3Q86UC2 AC110285.7-201ENST00000624417 1536 ntBASIC28.36■■■□□ 2.13
RSPH3Q86UC2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RSPH3Q86UC2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RSPH3Q86UC2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.35■■■□□ 2.13
RSPH3Q86UC2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RSPH3Q86UC2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RSPH3Q86UC2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.34■■■□□ 2.13
RSPH3Q86UC2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RSPH3Q86UC2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.34■■■□□ 2.13
RSPH3Q86UC2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RSPH3Q86UC2 AC022413.1-201ENST00000624602 984 ntBASIC28.33■■■□□ 2.13
RSPH3Q86UC2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RSPH3Q86UC2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.32■■■□□ 2.12
RSPH3Q86UC2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RSPH3Q86UC2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.31■■■□□ 2.12
RSPH3Q86UC2 ABHD17AP5-201ENST00000580133 923 ntBASIC28.31■■■□□ 2.12
RSPH3Q86UC2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RSPH3Q86UC2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RSPH3Q86UC2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RSPH3Q86UC2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
RSPH3Q86UC2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
RSPH3Q86UC2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.29■■■□□ 2.12
RSPH3Q86UC2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.29■■■□□ 2.12
RSPH3Q86UC2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RSPH3Q86UC2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RSPH3Q86UC2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.27■■■□□ 2.12
RSPH3Q86UC2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RSPH3Q86UC2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
RSPH3Q86UC2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RSPH3Q86UC2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RSPH3Q86UC2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RSPH3Q86UC2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RSPH3Q86UC2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
RSPH3Q86UC2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.25■■■□□ 2.11
RSPH3Q86UC2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.25■■■□□ 2.11
RSPH3Q86UC2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
RSPH3Q86UC2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RSPH3Q86UC2 AC148477.6-201ENST00000623746 465 ntBASIC28.24■■■□□ 2.11
RSPH3Q86UC2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
RSPH3Q86UC2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.23■■■□□ 2.11
RSPH3Q86UC2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH3Q86UC2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH3Q86UC2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.22■■■□□ 2.11
RSPH3Q86UC2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH3Q86UC2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH3Q86UC2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.21■■■□□ 2.11
RSPH3Q86UC2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.21■■■□□ 2.11
RSPH3Q86UC2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
RSPH3Q86UC2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
RSPH3Q86UC2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
RSPH3Q86UC2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RSPH3Q86UC2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH3Q86UC2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH3Q86UC2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
RSPH3Q86UC2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RSPH3Q86UC2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.17■■■□□ 2.1
RSPH3Q86UC2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH3Q86UC2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.17■■■□□ 2.1
RSPH3Q86UC2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms