Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc28Q80XJ3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Ttc28Q80XJ3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc28Q80XJ3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc28Q80XJ3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc28Q80XJ3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
Ttc28Q80XJ3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc28Q80XJ3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc28Q80XJ3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
Ttc28Q80XJ3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc28Q80XJ3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc28Q80XJ3 Gm14523-201ENSMUST00000117260 558 ntBASIC20.33■□□□□ 0.84
Ttc28Q80XJ3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc28Q80XJ3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ttc28Q80XJ3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc28Q80XJ3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Gm10420-201ENSMUST00000121713 882 ntBASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc28Q80XJ3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc28Q80XJ3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.16■□□□□ 0.82
Ttc28Q80XJ3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc28Q80XJ3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms