Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh19Q80TF3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh19Q80TF3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh19Q80TF3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pcdh19Q80TF3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh19Q80TF3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh19Q80TF3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
Pcdh19Q80TF3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdh19Q80TF3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh19Q80TF3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh19Q80TF3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh19Q80TF3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdh19Q80TF3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.17■■□□□ 1.3
Pcdh19Q80TF3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh19Q80TF3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh19Q80TF3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh19Q80TF3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.15■■□□□ 1.3
Pcdh19Q80TF3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.15■■□□□ 1.3
Pcdh19Q80TF3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh19Q80TF3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Pcdh19Q80TF3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh19Q80TF3 Gm6311-201ENSMUST00000073790 878 ntBASIC23.13■■□□□ 1.29
Pcdh19Q80TF3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh19Q80TF3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh19Q80TF3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Pcdh19Q80TF3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
Pcdh19Q80TF3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Pcdh19Q80TF3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.11■■□□□ 1.29
Pcdh19Q80TF3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh19Q80TF3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh19Q80TF3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh19Q80TF3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh19Q80TF3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdh19Q80TF3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh19Q80TF3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.08■■□□□ 1.29
Pcdh19Q80TF3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh19Q80TF3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh19Q80TF3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh19Q80TF3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh19Q80TF3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdh19Q80TF3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh19Q80TF3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh19Q80TF3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh19Q80TF3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh19Q80TF3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Pcdh19Q80TF3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.03■■□□□ 1.28
Pcdh19Q80TF3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.03■■□□□ 1.28
Pcdh19Q80TF3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh19Q80TF3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.02■■□□□ 1.28
Pcdh19Q80TF3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh19Q80TF3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh19Q80TF3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdh19Q80TF3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdh19Q80TF3 Gm37136-201ENSMUST00000194368 194 ntBASIC23.01■■□□□ 1.27
Pcdh19Q80TF3 Gm4799-201ENSMUST00000095396 657 ntBASIC23.01■■□□□ 1.27
Pcdh19Q80TF3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pcdh19Q80TF3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh19Q80TF3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Pcdh19Q80TF3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.99■■□□□ 1.27
Pcdh19Q80TF3 Mir6538-201ENSMUST00000183713 110 ntBASIC22.98■■□□□ 1.27
Pcdh19Q80TF3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh19Q80TF3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh19Q80TF3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Pcdh19Q80TF3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh19Q80TF3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh19Q80TF3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdh19Q80TF3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Pcdh19Q80TF3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdh19Q80TF3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh19Q80TF3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh19Q80TF3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh19Q80TF3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh19Q80TF3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh19Q80TF3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.94■■□□□ 1.26
Pcdh19Q80TF3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh19Q80TF3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh19Q80TF3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.93■■□□□ 1.26
Pcdh19Q80TF3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh19Q80TF3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh19Q80TF3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.92■■□□□ 1.26
Pcdh19Q80TF3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh19Q80TF3 Mir3960-201ENSMUST00000198213 73 ntBASIC22.92■■□□□ 1.26
Pcdh19Q80TF3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh19Q80TF3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh19Q80TF3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh19Q80TF3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Pcdh19Q80TF3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdh19Q80TF3 Gm11175-201ENSMUST00000116172 543 ntBASIC22.9■■□□□ 1.26
Pcdh19Q80TF3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh19Q80TF3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms