Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Csmd3Q80T79 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Csmd3Q80T79 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.76■□□□□ 0.27
Csmd3Q80T79 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Csmd3Q80T79 Gm14523-201ENSMUST00000117260 558 ntBASIC16.76■□□□□ 0.27
Csmd3Q80T79 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Csmd3Q80T79 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Csmd3Q80T79 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Csmd3Q80T79 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Csmd3Q80T79 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.74■□□□□ 0.27
Csmd3Q80T79 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Csmd3Q80T79 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Csmd3Q80T79 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Csmd3Q80T79 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Csmd3Q80T79 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Csmd3Q80T79 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Csmd3Q80T79 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Csmd3Q80T79 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Csmd3Q80T79 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.71■□□□□ 0.27
Csmd3Q80T79 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Csmd3Q80T79 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Csmd3Q80T79 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Csmd3Q80T79 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Csmd3Q80T79 Gm27502-201ENSMUST00000183495 199 ntBASIC16.7■□□□□ 0.26
Csmd3Q80T79 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.69■□□□□ 0.26
Csmd3Q80T79 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Csmd3Q80T79 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Csmd3Q80T79 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Csmd3Q80T79 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Csmd3Q80T79 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Csmd3Q80T79 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Csmd3Q80T79 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Csmd3Q80T79 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Csmd3Q80T79 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.67■□□□□ 0.26
Csmd3Q80T79 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csmd3Q80T79 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csmd3Q80T79 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.66■□□□□ 0.26
Csmd3Q80T79 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csmd3Q80T79 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csmd3Q80T79 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Csmd3Q80T79 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
Csmd3Q80T79 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csmd3Q80T79 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csmd3Q80T79 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csmd3Q80T79 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.64■□□□□ 0.25
Csmd3Q80T79 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csmd3Q80T79 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csmd3Q80T79 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.63■□□□□ 0.25
Csmd3Q80T79 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.63■□□□□ 0.25
Csmd3Q80T79 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csmd3Q80T79 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Csmd3Q80T79 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.61■□□□□ 0.25
Csmd3Q80T79 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csmd3Q80T79 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csmd3Q80T79 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.61■□□□□ 0.25
Csmd3Q80T79 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csmd3Q80T79 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Csmd3Q80T79 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.6■□□□□ 0.25
Csmd3Q80T79 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Csmd3Q80T79 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Csmd3Q80T79 Mir3960-201ENSMUST00000198213 73 ntBASIC16.59■□□□□ 0.25
Csmd3Q80T79 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Csmd3Q80T79 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.59■□□□□ 0.25
Csmd3Q80T79 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.59■□□□□ 0.25
Csmd3Q80T79 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Csmd3Q80T79 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Csmd3Q80T79 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Csmd3Q80T79 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Csmd3Q80T79 Gm5921-201ENSMUST00000075898 882 ntBASIC16.57■□□□□ 0.24
Csmd3Q80T79 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Csmd3Q80T79 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Csmd3Q80T79 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Csmd3Q80T79 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Csmd3Q80T79 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.56■□□□□ 0.24
Csmd3Q80T79 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.56■□□□□ 0.24
Csmd3Q80T79 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Csmd3Q80T79 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.56■□□□□ 0.24
Csmd3Q80T79 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Csmd3Q80T79 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Csmd3Q80T79 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.55■□□□□ 0.24
Csmd3Q80T79 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.55■□□□□ 0.24
Csmd3Q80T79 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.54■□□□□ 0.24
Csmd3Q80T79 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Csmd3Q80T79 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms