Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm22567-201ENSMUST00000175542 342 ntBASIC24.54■■□□□ 1.52
Prpf38bQ80SY5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Prpf38bQ80SY5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf38bQ80SY5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf38bQ80SY5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf38bQ80SY5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.52■■□□□ 1.52
Prpf38bQ80SY5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf38bQ80SY5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf38bQ80SY5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf38bQ80SY5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.51■■□□□ 1.51
Prpf38bQ80SY5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf38bQ80SY5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Prpf38bQ80SY5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Prpf38bQ80SY5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Prpf38bQ80SY5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Prpf38bQ80SY5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.49■■□□□ 1.51
Prpf38bQ80SY5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Prpf38bQ80SY5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prpf38bQ80SY5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prpf38bQ80SY5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.48■■□□□ 1.51
Prpf38bQ80SY5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf38bQ80SY5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf38bQ80SY5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf38bQ80SY5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.47■■□□□ 1.51
Prpf38bQ80SY5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf38bQ80SY5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Prpf38bQ80SY5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf38bQ80SY5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf38bQ80SY5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf38bQ80SY5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.45■■□□□ 1.5
Prpf38bQ80SY5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf38bQ80SY5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.45■■□□□ 1.5
Prpf38bQ80SY5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Prpf38bQ80SY5 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.43■■□□□ 1.5
Prpf38bQ80SY5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf38bQ80SY5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf38bQ80SY5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Prpf38bQ80SY5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf38bQ80SY5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf38bQ80SY5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf38bQ80SY5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf38bQ80SY5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.41■■□□□ 1.5
Prpf38bQ80SY5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf38bQ80SY5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf38bQ80SY5 Gm11687-201ENSMUST00000118911 886 ntBASIC24.39■■□□□ 1.49
Prpf38bQ80SY5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.39■■□□□ 1.49
Prpf38bQ80SY5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prpf38bQ80SY5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf38bQ80SY5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf38bQ80SY5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Prpf38bQ80SY5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf38bQ80SY5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Prpf38bQ80SY5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prpf38bQ80SY5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Prpf38bQ80SY5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf38bQ80SY5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.35■■□□□ 1.49
Prpf38bQ80SY5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf38bQ80SY5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.34■■□□□ 1.49
Prpf38bQ80SY5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Prpf38bQ80SY5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf38bQ80SY5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf38bQ80SY5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Prpf38bQ80SY5 Gm9806-201ENSMUST00000051080 552 ntBASIC24.33■■□□□ 1.49
Prpf38bQ80SY5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Prpf38bQ80SY5 Scarna2-201ENSMUST00000157560 414 ntBASIC24.32■■□□□ 1.48
Prpf38bQ80SY5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Prpf38bQ80SY5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.32■■□□□ 1.48
Prpf38bQ80SY5 Gm7332-201ENSMUST00000118351 454 ntBASIC24.31■■□□□ 1.48
Prpf38bQ80SY5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf38bQ80SY5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf38bQ80SY5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf38bQ80SY5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf38bQ80SY5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Prpf38bQ80SY5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Prpf38bQ80SY5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.3■■□□□ 1.48
Prpf38bQ80SY5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf38bQ80SY5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.29■■□□□ 1.48
Prpf38bQ80SY5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 Gm5812-201ENSMUST00000061073 957 ntBASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Prpf38bQ80SY5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf38bQ80SY5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf38bQ80SY5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf38bQ80SY5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf38bQ80SY5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf38bQ80SY5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms