Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 MIR6090-201ENST00000622481 60 ntBASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 AC135983.2-203ENST00000454486 1613 ntBASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.17■■■□□ 2.1
FOXR2Q6PJQ5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.16■■■□□ 2.1
FOXR2Q6PJQ5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
FOXR2Q6PJQ5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
FOXR2Q6PJQ5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
FOXR2Q6PJQ5 AC100797.4-201ENST00000631653 1827 ntBASIC28.15■■■□□ 2.1
FOXR2Q6PJQ5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXR2Q6PJQ5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXR2Q6PJQ5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.15■■■□□ 2.1
FOXR2Q6PJQ5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
FOXR2Q6PJQ5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.14■■■□□ 2.1
FOXR2Q6PJQ5 BX255925.1-201ENST00000566954 1854 ntBASIC28.14■■■□□ 2.1
FOXR2Q6PJQ5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
FOXR2Q6PJQ5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
FOXR2Q6PJQ5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
FOXR2Q6PJQ5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 LINC00273-201ENST00000539813 1452 ntBASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 AP002414.2-202ENST00000590929 1450 ntBASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
FOXR2Q6PJQ5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
FOXR2Q6PJQ5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
FOXR2Q6PJQ5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.1■■■□□ 2.09
FOXR2Q6PJQ5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.1■■■□□ 2.09
FOXR2Q6PJQ5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
FOXR2Q6PJQ5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.09■■■□□ 2.09
FOXR2Q6PJQ5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.09■■■□□ 2.09
FOXR2Q6PJQ5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.09■■■□□ 2.09
FOXR2Q6PJQ5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
FOXR2Q6PJQ5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
FOXR2Q6PJQ5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
FOXR2Q6PJQ5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR2Q6PJQ5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR2Q6PJQ5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
FOXR2Q6PJQ5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
FOXR2Q6PJQ5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
FOXR2Q6PJQ5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
FOXR2Q6PJQ5 AC087741.3-201ENST00000624270 1347 ntBASIC28.05■■■□□ 2.08
FOXR2Q6PJQ5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR2Q6PJQ5 LINC01003-201ENST00000564834 1764 ntBASIC28.04■■■□□ 2.08
FOXR2Q6PJQ5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR2Q6PJQ5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
FOXR2Q6PJQ5 WHAMMP2-203ENST00000563942 1603 ntBASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR2Q6PJQ5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.02■■■□□ 2.08
FOXR2Q6PJQ5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
FOXR2Q6PJQ5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
FOXR2Q6PJQ5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
FOXR2Q6PJQ5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
FOXR2Q6PJQ5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28■■■□□ 2.07
FOXR2Q6PJQ5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28■■■□□ 2.07
FOXR2Q6PJQ5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
FOXR2Q6PJQ5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
FOXR2Q6PJQ5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.98■■■□□ 2.07
FOXR2Q6PJQ5 AL162393.1-201ENST00000437852 946 ntBASIC27.98■■■□□ 2.07
FOXR2Q6PJQ5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
FOXR2Q6PJQ5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXR2Q6PJQ5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
FOXR2Q6PJQ5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
FOXR2Q6PJQ5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXR2Q6PJQ5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXR2Q6PJQ5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXR2Q6PJQ5 AC018358.1-201ENST00000631079 1402 ntBASIC27.93■■■□□ 2.06
FOXR2Q6PJQ5 AL121749.1-202ENST00000609313 2153 ntBASIC27.93■■■□□ 2.06
FOXR2Q6PJQ5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
FOXR2Q6PJQ5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.92■■■□□ 2.06
FOXR2Q6PJQ5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR2Q6PJQ5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR2Q6PJQ5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR2Q6PJQ5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR2Q6PJQ5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
FOXR2Q6PJQ5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.91■■■□□ 2.06
FOXR2Q6PJQ5 AC044849.2-201ENST00000606596 710 ntBASIC27.91■■■□□ 2.06
FOXR2Q6PJQ5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.91■■■□□ 2.06
FOXR2Q6PJQ5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.9■■■□□ 2.06
FOXR2Q6PJQ5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.9■■■□□ 2.06
FOXR2Q6PJQ5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXR2Q6PJQ5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms