Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ShbQ6PD21 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ShbQ6PD21 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.73■■□□□ 1.87
ShbQ6PD21 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ShbQ6PD21 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.72■■□□□ 1.87
ShbQ6PD21 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
ShbQ6PD21 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ShbQ6PD21 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ShbQ6PD21 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ShbQ6PD21 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ShbQ6PD21 Gm14523-201ENSMUST00000117260 558 ntBASIC26.68■■□□□ 1.86
ShbQ6PD21 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ShbQ6PD21 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ShbQ6PD21 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ShbQ6PD21 Gm5812-201ENSMUST00000061073 957 ntBASIC26.67■■□□□ 1.86
ShbQ6PD21 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.66■■□□□ 1.86
ShbQ6PD21 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
ShbQ6PD21 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ShbQ6PD21 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ShbQ6PD21 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ShbQ6PD21 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ShbQ6PD21 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
ShbQ6PD21 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.65■■□□□ 1.86
ShbQ6PD21 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ShbQ6PD21 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ShbQ6PD21 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
ShbQ6PD21 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
ShbQ6PD21 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ShbQ6PD21 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ShbQ6PD21 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.62■■□□□ 1.85
ShbQ6PD21 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ShbQ6PD21 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ShbQ6PD21 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
ShbQ6PD21 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.6■■□□□ 1.85
ShbQ6PD21 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.58■■□□□ 1.85
ShbQ6PD21 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShbQ6PD21 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShbQ6PD21 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.55■■□□□ 1.84
ShbQ6PD21 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
ShbQ6PD21 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ShbQ6PD21 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ShbQ6PD21 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.53■■□□□ 1.84
ShbQ6PD21 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.53■■□□□ 1.84
ShbQ6PD21 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShbQ6PD21 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.52■■□□□ 1.84
ShbQ6PD21 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ShbQ6PD21 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ShbQ6PD21 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.52■■□□□ 1.84
ShbQ6PD21 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ShbQ6PD21 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ShbQ6PD21 Gm37136-201ENSMUST00000194368 194 ntBASIC26.51■■□□□ 1.83
ShbQ6PD21 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ShbQ6PD21 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
ShbQ6PD21 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
ShbQ6PD21 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ShbQ6PD21 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ShbQ6PD21 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ShbQ6PD21 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
ShbQ6PD21 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ShbQ6PD21 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ShbQ6PD21 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ShbQ6PD21 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ShbQ6PD21 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.47■■□□□ 1.83
ShbQ6PD21 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ShbQ6PD21 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ShbQ6PD21 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ShbQ6PD21 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ShbQ6PD21 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.46■■□□□ 1.83
ShbQ6PD21 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ShbQ6PD21 Gm5921-201ENSMUST00000075898 882 ntBASIC26.46■■□□□ 1.83
ShbQ6PD21 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.46■■□□□ 1.83
ShbQ6PD21 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ShbQ6PD21 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
ShbQ6PD21 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ShbQ6PD21 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ShbQ6PD21 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ShbQ6PD21 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ShbQ6PD21 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ShbQ6PD21 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ShbQ6PD21 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
ShbQ6PD21 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ShbQ6PD21 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.42■■□□□ 1.82
ShbQ6PD21 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ShbQ6PD21 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ShbQ6PD21 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ShbQ6PD21 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.41■■□□□ 1.82
ShbQ6PD21 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
ShbQ6PD21 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ShbQ6PD21 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.4■■□□□ 1.82
ShbQ6PD21 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.39■■□□□ 1.82
ShbQ6PD21 Gm10420-201ENSMUST00000121713 882 ntBASIC26.39■■□□□ 1.82
ShbQ6PD21 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ShbQ6PD21 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ShbQ6PD21 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.38■■□□□ 1.81
ShbQ6PD21 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.38■■□□□ 1.81
ShbQ6PD21 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ShbQ6PD21 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ShbQ6PD21 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.37■■□□□ 1.81
ShbQ6PD21 Gm15546-201ENSMUST00000122095 826 ntBASIC26.36■■□□□ 1.81
ShbQ6PD21 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms